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Txndc16 Gene Detail
Summary
  • Symbol
    Txndc16
  • Name
    thioredoxin domain containing 16
  • Synonyms
    5730420B22Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917811
    NCBI Gene: 70561
  • Alliance
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:45134448-45219538 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 14, 22.77 cM, cytoband C1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    391 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917811
protein coding gene Chr14:45133465-45220328 (-)
129S1/SvImJ MGP_129S1SvImJ_G0021204
protein coding gene Chr14:38740341-38834917 (-)
A/J MGP_AJ_G0021150
protein coding gene Chr14:37588608-37682290 (-)
AKR/J MGP_AKRJ_G0021128
protein coding gene Chr14:39074838-39162762 (-)
BALB/cJ MGP_BALBcJ_G0021154
protein coding gene Chr14:37642788-37733673 (-)
C3H/HeJ MGP_C3HHeJ_G0020937
protein coding gene Chr14:38876555-38970808 (-)
C57BL/6NJ MGP_C57BL6NJ_G0021588
protein coding gene Chr14:40420820-40524551 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0019147
protein coding gene Chr14:37019596-37105337 (-)
CAST/EiJ MGP_CASTEiJ_G0020462
protein coding gene Chr14:35996909-36085136 (-)
CBA/J MGP_CBAJ_G0020903
protein coding gene Chr14:41704852-41806908 (-)
DBA/2J MGP_DBA2J_G0021026
protein coding gene Chr14:37517576-37604000 (-)
FVB/NJ MGP_FVBNJ_G0021010
protein coding gene Chr14:37269765-37364392 (-)
LP/J MGP_LPJ_G0021096
protein coding gene Chr14:39028350-39121677 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0021036
protein coding gene Chr14:41116881-41218147 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0021621
protein coding gene Chr14:38610597-38703785 (-)
PWK/PhJ MGP_PWKPhJ_G0020211
protein coding gene Chr14:34376094-34465870 (-)
SPRET/EiJ MGP_SPRETEiJ_G0020033
protein coding gene Chr14:34741349-34842871 (-)
WSB/EiJ MGP_WSBEiJ_G0020518
protein coding gene Chr14:38716296-38809865 (-)



Homology
more
  • Human Ortholog
    TXNDC16, thioredoxin domain containing 16
  • Vertebrate Orthologs
    10
  • Human Ortholog
    TXNDC16, thioredoxin domain containing 16
    Orthology source: HomoloGene, HGNC
  • Synonyms
    ERp90, KIAA1344
  • Links
    NCBI Gene ID: 57544
    neXtProt AC: NX_Q9P2K2
    UniProt: Q9P2K2

  • Chr Location
    14q22.1; chr14:52430590-52552583 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 70561 NCBI Gene Model | MGI Sequence Detail 85091 C57BL/6J ±  kb
transcript NM_001310534 RefSeq | MGI Sequence Detail 4062 C57BL/6  
polypeptide Q7TN22 UniProt | EBI | MGI Sequence Detail 820 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 54
    cDNA 54

    Microarray probesets 3
Other
Accession IDs
less
MGI:2145859
References
more
  • Summaries
    All 26
    Gene Ontology 3
    Phenotypes 3
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory