Rb1cc1
Gene Detail

Symbol Name ID

Rb1cc1 RB1-inducible coiled-coil 1 MGI:1341850

Synonyms

2900055E04Rik, 5930404L04Rik, Cc1, Fip200, LaXp180, mKIAA0203

Feature Type

protein coding gene

Genetic Map

Chromosome 1

1.89 cM, cytoband A2
Detailed Genetic Map ± 1 cM


Mapping data(4)

Sequence Map

Chr1:6206197-6276648 bp, + strand From VEGA annotation of GRCm38   70452 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:7659  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken

Gene Tree: Rb1cc1

Human homologs

Human Homolog		RB1CC1, RB1-inducible coiled-coil 1
NCBI Gene ID		9821
neXtProt AC		NX_Q8TDY2
Human Synonyms		ATG17, CC1, FIP200
Human Chr (Location)		8q11; chr8:53535018-53627026 (-)  GRCh37.p13
Disease Associations		(1) Diseases Associated with Human RB1CC1

Alleles and phenotypes

All alleles(11) : Targeted(6) Gene trapped(5)
 

Homozygous mutation of this gene results in embryonic lethality at mid/late gestation associated with heart failure and liver degeneration.

 
Phenotype Images(2)

Gene Ontology (GO) classifications

All GO classifications: (26 annotations)

Process	autophagic vacuole assembly, autophagy, ...
Component	cytoplasm, intracellular, ...
Function	protein binding, protein kinase binding

External Resources: FuncBase

Expression

Literature Summary: (9 records)

Data Summary: Results (48)    Tissues (30)    Images (12)
Theiler Stages: 6, 7, 9, 11, 13, 15, 17, 19, 20, 21, 22, 23, 24, 25, 26

Assay Type	Results
Immunohistochemistry	11
RNA in situ	22
Northern blot	15

cDNA source data(15)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(18) cDNA(18)
Microarray probesets(6)

Other database links

VEGA Gene Model	OTTMUSG00000033467 (Evidence)
Ensembl Gene Model	ENSMUSG00000025907 (Evidence)
Entrez Gene	12421 (Evidence)
NIA Mouse Gene Index	U000013
Consensus CDS Project	CCDS35507.1
International Mouse Knockout Project Status	Rb1cc1

Sequences

Length	Strain/Species
genomic	OTTMUSG00000033467	VEGA Gene Model | MGI Sequence Detail	70452	C57BL/6J
transcript	OTTMUST00000084091	VEGA | MGI Sequence Detail	7607	Not Applicable
polypeptide	OTTMUSP00000045266	VEGA | MGI Sequence Detail	1588	Not Applicable

All sequences(90) RefSeq(6) UniProt(12)

Polymorphisms

SNPs within 2kb(507 from dbSNP Build 137)

Protein-related information

Resource	ID	Description
InterPro	IPR019460	Autophagy-related protein 11
Protein Ontology	PR:000013774	RB1-inducible coiled-coil protein 1

References

(Earliest) J:51752 Maucuer A, et al., Stathmin interaction with a putative kinase and coiled-coil-forming protein domains. Proc Natl Acad Sci U S A. 1995 Apr 11;92(8):3100-4
(Latest) J:200806 Chen D, et al., CCCP-Induced LC3 lipidation depends on Atg9 whereas FIP200/Atg13 and Beclin 1/Atg14 are dispensable. Biochem Biophys Res Commun. 2013 Mar 8;432(2):226-30
All references(56)

Other accession IDs

MGI:1920276, MGI:1924359