About   Help   FAQ
Sart1 Gene Detail
Summary
  • Symbol
    Sart1
  • Name
    squamous cell carcinoma antigen recognized by T cells 1
  • Synonyms
    U5-110K
  • Feature Type
    protein coding gene
  • IDs
    MGI:1309453
    NCBI Gene: 20227
  • Gene Overview
    MyGene.info: SART1
Location & Maps
more
  • Sequence Map
    Chr19:5377523-5388703 bp, - strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      11181 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 19, 4.31 cM, cytoband A
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    SART1, squamous cell carcinoma antigen recognized by T-cells 1
  • Vertebrate Orthologs
    8
  • Human Ortholog
    SART1, squamous cell carcinoma antigen recognized by T-cells 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    Ara1, HOMS1, SART1259, SNRNP110, Snu66
  • Links
    NCBI Gene ID: 9092
    neXtProt AC: NX_O43290

  • Chr Location
    11q13.1; chr11:65961689-65980136 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    14
  • Gene trapped
    11
  • Targeted
    3
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000039148 Ensembl Gene Model | MGI Sequence Detail 11181 C57BL/6J ±  kb
transcript ENSMUST00000044207 Ensembl | MGI Sequence Detail 5091 Not Applicable  
polypeptide ENSMUSP00000047397 Ensembl | MGI Sequence Detail 806 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    28 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000014461 U4/U6.U5 tri-snRNP-associated protein 1
  • InterPro Domains
    IPR005011 SNU66/SART1 family
Molecular
Reagents
less
  • All nucleic 93
    cDNA 92
    Primer pair 1

    Microarray probesets 5
References
more
  • Summaries
    All 34
    Developmental Gene Expression 5
    Gene Ontology 4
    Phenotypes 6
  • Earliest
    J:49838 Gotoh M, et al., Sequence analysis of genes encoding rodent homologues of the human tumor-rejection antigen SART-1. Jpn J Cancer Res. 1998 Aug;89(8):849-54
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
09/20/2016
MGI 6.05
The Jackson Laboratory