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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TNF HGNC:11892 (HGNC)
7124 (Entrez Gene)
191160 (OMIM)
TNF (Alliance of Genome Resources)
Chr6 p21.33 Chr6:31575565-31578336 (+)
GRCh38
acne
adult respiratory distress syndrome
Alzheimer's disease
anterior uveitis
aplastic anemia
asthma
atopic dermatitis
bacterial pneumonia
Behcet's disease
beta thalassemia
breast adenocarcinoma
breast cancer
bronchopulmonary dysplasia
cerebral infarction
cervical cancer
chorioamnionitis
chronic obstructive pulmonary disease
coronary artery disease
coronary restenosis
cystic fibrosis
dermatitis
dermatitis herpetiformis
diabetic angiopathy
diabetic retinopathy
erythema nodosum
esophagitis
extrinsic allergic alveolitis
farmer's lung
Gaucher's disease
Graves' disease
Graves ophthalmopathy
hemochromatosis
hepatitis B
hepatocellular carcinoma
hidradenitis suppurativa
high grade glioma
hypertension
hypochromic microcytic anemia
intermediate uveitis
iron deficiency anemia
Kawasaki disease
leprosy
liver disease
low tension glaucoma
lung non-small cell carcinoma
malaria
migraine
migraine without aura
mucocutaneous leishmaniasis
multiple myeloma
multiple sclerosis
neutropenia
obstructive sleep apnea
open-angle glaucoma
paracoccidioidomycosis
pre-eclampsia
primary open angle glaucoma
prostate cancer
psoriasis
psoriatic arthritis
pulmonary fibrosis
pulmonary sarcoidosis
pulmonary tuberculosis
pustulosis of palm and sole
renal cell carcinoma
rheumatoid arthritis
rhinitis
schizophrenia
scleritis
sensorineural hearing loss
silicosis
Sjogren's syndrome
skin disease
systemic lupus erythematosus
thrombocytopenia
trachoma
type 1 diabetes mellitus
typhoid fever
uveitis
vascular dementia
visceral leishmaniasis
visual epilepsy
P01375 (UniProt | EBI)
NM_000594 (RefSeq)
mouse Tnf MGI:104798 (MGI)
21926 (Entrez Gene)
Gene Tree
Tnf (Alliance of Genome Resources)
Chr17 18.59 cM Chr17:35418357-35420983 (-)
GRCm39
aortic valve stenosis
congestive heart failure
dilated cardiomyopathy
heart valve disease
idiopathic pulmonary fibrosis
inflammatory bowel disease
multiple sclerosis
rheumatoid arthritis
spondyloarthropathy
ENSMUSG00000024401 (Ensembl Gene Model)
ENSMUSP00000025263 (Ensembl)
ENSMUST00000025263 (Ensembl)
rat Tnf RGD:3876 (Rat Genome Database)
24835 (Entrez Gene)
Tnf (Alliance of Genome Resources)
Chr20 p12 P16599 (UniProt | EBI)
NM_012675 (RefSeq)
zebrafish tnfa ZDB-GENE-050317-1 (Zebrafish Model Organism Database)
405785 (Entrez Gene)
tnfa (Alliance of Genome Resources)
Chr19 NP_998024 (RefSeq)
NM_212859 (RefSeq)
tnfb ZDB-GENE-050601-2 (Zebrafish Model Organism Database)
554167 (Entrez Gene)
tnfb (Alliance of Genome Resources)
Chr15 NP_001019618 (RefSeq)
NM_001024447 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory