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Slc22a29 Gene Detail
Summary
  • Symbol
    Slc22a29
  • Name
    solute carrier family 22. member 29
  • Synonyms
    D630002G06Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:3605624
    NCBI Gene: 236293
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:8137529-8196264 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 19, 5.40 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1251 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3605624
protein coding gene Chr19:8137529-8230739 (-)
129S1/SvImJ MGP_129S1SvImJ_G0024799
protein coding gene Chr19:5393278-5394608 (-)
A/J MGP_AJ_G0024766
protein coding gene Chr19:4679619-4732925 (-)
AKR/J MGP_AKRJ_G0024742
protein coding gene Chr19:5148659-5355635 (-)
BALB/cJ MGP_BALBcJ_G0024766
protein coding gene Chr19:4747971-4797225 (-)
C3H/HeJ MGP_C3HHeJ_G0024533
protein coding gene Chr19:5267533-5478315 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025214
protein coding gene Chr19:5490923-5697310 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0024006
protein coding gene Chr19:4891269-4892586 (-)
CBA/J MGP_CBAJ_G0024506
protein coding gene Chr19:5205056-5824277 (-)
DBA/2J MGP_DBA2J_G0024633
protein coding gene Chr19:4585093-4812253 (-)
FVB/NJ no annotation
LP/J MGP_LPJ_G0024719
protein coding gene Chr19:4892721-4987151 (-)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0025260
protein coding gene Chr19:4948207-5289386 (-)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0023556
protein coding gene Chr19:4735659-4743447 (-)
WSB/EiJ MGP_WSBEiJ_G0024068
protein coding gene Chr19:5150849-5152170 (-)



Homology
more
  • Human Ortholog
    SLC22A10, solute carrier family 22 member 10
  • Vertebrate Orthologs
    5
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SLC22A10, solute carrier family 22 member 10
  • Synonyms
    hOAT5, OAT5
  • Links
    NCBI Gene ID: 387775
    neXtProt AC: NX_Q63ZE4
    UniProt: Q63ZE4

  • Chr Location
    11q12.3; chr11:63268022-63363144 (+)  GRCh38

  • Human Ortholog
    SLC22A25, solute carrier family 22 member 25
  • Synonyms
    HIMTP, UST6
  • Links
    NCBI Gene ID: 387601
    neXtProt AC: NX_Q6T423
    UniProt: Q6T423

  • Chr Location
    11q12.3; chr11:63158437-63243599 (-)  GRCh38

  • Human Ortholog
    SLC22A9, solute carrier family 22 member 9
  • Synonyms
    HOAT4, OAT4, OAT7, ust3, UST3H
  • Links
    NCBI Gene ID: 114571
    neXtProt AC: NX_Q8IVM8
    UniProt: Q8IVM8

  • Chr Location
    11q12.3; chr11:63369785-63410294 (+)  GRCh38

Human Diseases
more
  • Diseases
    2 with human SLC22A9 associations

Human Disease Mouse Models
      
IDs
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    5 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000075044 Ensembl Gene Model | MGI Sequence Detail 58736 C57BL/6J ±  kb
    transcript ENSMUST00000113298 Ensembl | MGI Sequence Detail 2271 Not Applicable  
    polypeptide ENSMUSP00000108923 Ensembl | MGI Sequence Detail 551 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      4 Sequences
    • InterPro Domains
      IPR005828 Major facilitator, sugar transporter-like
      IPR020846 Major facilitator superfamily domain
      IPR036259 MFS transporter superfamily
    Molecular
    Reagents
    less
    • All nucleic 3
      cDNA 2
      Primer pair 1

      Microarray probesets 1
    References
    more
    • Summaries
      All 18
      Developmental Gene Expression 1
      Gene Ontology 2
      Phenotypes 5
    • Earliest
      J:157965 Wu W, et al., Analysis of a large cluster of SLC22 transporter genes, including novel USTs, reveals species-specific amplification of subsets of family members. Physiol Genomics. 2009 Jul 9;38(2):116-24
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    last database update
    06/12/2024
    MGI 6.13
    The Jackson Laboratory