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BC028528 Gene Detail
Summary
  • Symbol
    BC028528
  • Name
    cDNA sequence BC028528
  • Synonyms
    L259, MGC:41379
  • Feature Type
    protein coding gene
  • IDs
    MGI:2385885
    NCBI Gene: 229600
  • Alliance
    genome feature page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:95791266-95799317 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 41.44 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    226 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2385885
 protein coding gene Chr3:95789665-95800186 (-)
129S1/SvImJ ENSMUSG00200043258
 protein coding gene Chr3:92450278-92458323 (-)
A/J ENSMUSG00195043128
 protein coding gene Chr3:92774545-92782594 (-)
AKR/J ENSMUSG00220032292
 protein coding gene Chr3:91161601-91169646 (-)
BALB/cJ ENSMUSG00180040385
 protein coding gene Chr3:92773959-92782014 (-)
C3H/HeJ ENSMUSG00175026466
 protein coding gene Chr3:92418196-92426244 (-)
C57BL/6NJ ENSMUSG00215032464
 protein coding gene Chr3:93137058-93145111 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025357
 protein coding gene Chr3:89964501-89973308 (-)
CAST/EiJ ENSTCUG00005047793
 protein coding gene Chr3:92970446-92978476 (-)
CBA/J ENSMUSG00210051163
 protein coding gene Chr3:92955667-92963718 (-)
DBA/2J ENSMUSG00185042820
 protein coding gene Chr3:93372756-93380803 (-)
FVB/NJ ENSMUSG00205042570
 protein coding gene Chr3:92068991-92077038 (-)
JF1/MsJ ENSUMUG00000046607
 protein coding gene Chr3:92265034-92273188 (-)
LP/J ENSMUSG00230042324
 protein coding gene Chr3:95313689-95321734 (-)
NOD/ShiLtJ ENSMUSG00190046303
 protein coding gene Chr3:93480782-93488832 (-)
NZO/HlLtJ ENSMUSG00225011797
 protein coding gene Chr3:97735676-97743731 (-)
PWK/PhJ ENSLUMG00010051093
 protein coding gene Chr3:92244769-92252901 (-)
SPRET/EiJ ENSMSPG00010041325
 protein coding gene Chr3:92548785-92556141 (-)
WSB/EiJ ENSIUOG00005028294
 protein coding gene Chr3:92893631-92901679 (-)



Homology
more
  • Human Ortholog
    C1orf54, chromosome 1 open reading frame 54
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C1orf54, chromosome 1 open reading frame 54
  • Links
    NCBI Gene ID: 79630
    UniProt: Q8WWF1

  • Chr Location
    1q21.2; chr1:150268034-150281735 (+)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    1 phenotype from multigenic genotypes
    12 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a null allele exhibit impaired and delayed post-ischemia-reperfusion injury renal recovery and lower survival after injury.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    598
  • Tissues
    1
  • cDNA Data
    16
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000038543 Ensembl Gene Model | MGI Sequence Detail 8052 C57BL/6J ±  kb
transcript ENSMUST00000171519 Ensembl | MGI Sequence Detail 447 Not Applicable  
polypeptide ENSMUSP00000127666 Ensembl | MGI Sequence Detail 148 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 17
    cDNA 16
    Other 1

    Microarray probesets 3
References
more
  • Summaries
    All 33
    Developmental Gene Expression 1
    Diseases 1
    Gene Ontology 2
    Phenotypes 12
  • Earliest
    J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
  • Latest
    J:366461 Panza P, et al., The lung microvasculature promotes alveolar type 2 cell differentiation via secreted SPARCL1. Stem Cell Reports. 2025 Apr 8;20(4):102451
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory