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Mapping Data
Experiment
  • Experiment
    TEXT-Physical Mapping
  • Chromosome
    X
  • Reference
    J:77062 Chureau C, et al., Comparative sequence analysis of the X-inactivation center region in mouse, human, and bovine. Genome Res. 2002 Jun;12(6):894-908
  • ID
    MGI:2653498
Genes
GeneAlleleAssay TypeDescription
Slc16a2 overlapping clones, direct sequencing, sequence analysis
Zcchc13 overlapping clones, direct sequencing, sequence analysis
Ftx overlapping clones, direct sequencing, sequence analysis
Jpx overlapping clones, direct sequencing, sequence analysis
Xist overlapping clones, direct sequencing, sequence analysis
Tsix overlapping clones, direct sequencing, sequence analysis
Tsx overlapping clones, direct sequencing, sequence analysis
Chic1 overlapping clones, direct sequencing, sequence analysis
Cdx4 overlapping clones, direct sequencing, sequence analysis
4930519F16Rik overlapping clones, direct sequencing, sequence analysis
Nap1l2 overlapping clones, direct sequencing, sequence analysis
Notes
  • Experiment
    The authors sequenced a region of 714 kb of the mouse X chromosome centered around the Xist gene. A combination of ab-inition gene prediction, homology-based gene prediction and RT-PCR or EST analyses were used to identify genes in the region. The order and orientation of genes were determined to be: 5'-Slc16a2-3' - 3'-Cnbp2-5' - 5'- B230206F22Rik-3' - 3'-2010000I03Rik-5' - 5'-Xist-3' - 3'-Tsix-5' - 3'-Tsx-5' - 3'-Chic1-5' - 3'-Cdx4-5' - 5'-4930519F16Rik-3' - 5'-Nap1l2-3' - telomere.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/28/2024
MGI 6.13
The Jackson Laboratory