Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ZZEF1
  • Mouse genes Zzef1
  • Rat genes Zzef1
  • Zfish genes zzef1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Zzef1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0140566	histone reader activity	ZZEF1	IMP		Human	PMID:33227311
Molecular Function	GO:0070577	lysine-acetylated histone binding	ZZEF1	IDA		Human	PMID:33227311
Molecular Function	GO:0035064	methylated histone binding	ZZEF1	IDA		Human	PMID:33227311
Molecular Function	GO:0005515	protein binding	ZZEF1	IPI	UniProtKB:Q99612	Human	PMID:33227311
Molecular Function	GO:0061659	ubiquitin-like protein ligase activity	Zzef1	IMP	MGI:MGI:5474781	Mouse	PMID:33158444
Cellular Component	GO:0009986	cell surface	Zzef1	IDA		Mouse	PMID:25709106
Cellular Component	GO:0098794	postsynapse	Zzef1	IDA		Mouse	PMID:25709106
Cellular Component	GO:0048786	presynaptic active zone	Zzef1	IDA		Mouse	PMID:25709106
Cellular Component	GO:0045202	synapse	Zzef1	IDA		Mouse	PMID:33158444
Biological Process	GO:0007405	neuroblast proliferation	Zzef1	IMP	MGI:MGI:5474781	Mouse	PMID:33158444
Biological Process	GO:0016567	protein ubiquitination	Zzef1	IMP	MGI:MGI:5474781	Mouse	PMID:33158444
Biological Process	GO:0050730	regulation of peptidyl-tyrosine phosphorylation	Zzef1	IMP	MGI:MGI:5474781	Mouse	PMID:33158444
Biological Process	GO:0048167	regulation of synaptic plasticity	Zzef1	IMP	MGI:MGI:3796166	Mouse	PMID:25709106
Biological Process	GO:0048167	regulation of synaptic plasticity	Zzef1	IMP	MGI:MGI:5474781	Mouse	PMID:33158444
Biological Process	GO:0035249	synaptic transmission, glutamatergic	Zzef1	IMP	MGI:MGI:3796166	Mouse	PMID:25709106
Biological Process	GO:0008542	visual learning	Zzef1	IMP	MGI:MGI:3796166	Mouse	PMID:25709106
Biological Process	GO:0008542	visual learning	Zzef1	IMP	MGI:MGI:5474781	Mouse	PMID:33158444

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern