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Zzef1 Gene Detail
Summary
  • Symbol
    Zzef1
  • Name
    zinc finger, ZZ-type with EF hand domain 1
  • Synonyms
    8430405D05Rik, C130099L13Rik, mKIAA0399
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444286
    NCBI Gene: 195018
Location & Maps
more
  • Sequence Map
    Chr11:72796226-72927120 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      130895 bp   ±  kb flank

  • Genome Browsers
Homology
more
  • Human Ortholog
    ZZEF1, zinc finger ZZ-type and EF-hand domain containing 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    ZZEF1, zinc finger ZZ-type and EF-hand domain containing 1
    Orthology source: HomoloGene
  • Synonyms
    ZZZ4
  • Links
    NCBI Gene ID: 23140
    neXtProt AC: NX_O43149

  • Chr Location
    17p13.2; chr17:4004445-4143020 (-)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 9027
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 western clawed frog;1 zebrafish
  • HCOP
    human homology predictions: ZZEF1
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    6 phenotypes from 1 allele in 1 genetic background
    14 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryogenesis
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
tumorigenesis
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    9
  • Chemically induced (other)
    1
  • Gene trapped
    4
  • Targeted
    4
  • Genomic Mutations
    2 involving Zzef1
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000006113 VEGA Gene Model | MGI Sequence Detail 130895 C57BL/6J ±  kb
transcript OTTMUST00000013815 VEGA | MGI Sequence Detail 11306 Not Applicable  
polypeptide OTTMUSP00000006408 VEGA | MGI Sequence Detail 2953 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    587 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 5
Other
Accession IDs
less
MGI:1918726, MGI:2144680, MGI:3039564
References
more
  • Summaries
    All 33
    Gene Ontology 2
    Phenotypes 14
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
05/17/2016
MGI 6.03
The Jackson Laboratory