Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes TG
  • Mouse genes Tg
  • Rat genes Tg
  • Zfish genes tg
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Tg

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0043168	anion binding	Tg	IDA		Rat	PMID:1138879|RGD:8548649
Molecular Function	GO:0042802	identical protein binding	TG	IDA		Human	PMID:32025030
Molecular Function	GO:0042802	identical protein binding	TG	IDA		Human	PMID:8626858
Molecular Function	GO:0042802	identical protein binding	Tg	IDA		Mouse	MGI:MGI:6377840|PMID:19276074
Molecular Function	GO:0042802	identical protein binding	Tg	IPI	RGD:3848	Rat	PMID:12401114|RGD:7205668
Molecular Function	GO:0005515	protein binding	TG	IPI	UniProtKB:Q99523	Human	PMID:18687776
Molecular Function	GO:0005515	protein binding	Tg	IPI	UniProtKB:Q99523	Rat	PMID:18687776|RGD:25671396
Molecular Function	GO:0005515	protein binding	Tg	IPI	UniProtKB:P06761	Rat	PMID:7916014|RGD:8554190
Molecular Function	GO:0005515	protein binding	Tg	IPI	UniProtKB:P38659	Rat	PMID:7916014|RGD:8554190
Molecular Function	GO:0044877	protein-containing complex binding	Tg	IPI	RGD:2843|RGD:619781	Rat	PMID:11884402|RGD:728752
Molecular Function	GO:0044877	protein-containing complex binding	Tg	IPI	RGD:2266|RGD:620288	Rat	PMID:12401114|RGD:7205668
Molecular Function	GO:0051087	protein-folding chaperone binding	Tg	IPI	RGD:2843	Rat	PMID:11884402|RGD:728752
Molecular Function	GO:0051087	protein-folding chaperone binding	Tg	IPI	RGD:619781	Rat	PMID:11884402|RGD:728752
Molecular Function	GO:0005102	signaling receptor binding	Tg	IDA		Rat	PMID:10403180|RGD:8548646
Cellular Component	GO:0005783	endoplasmic reticulum	Tg	IDA		Rat	PMID:12401114|RGD:7205668
Cellular Component	GO:0005783	endoplasmic reticulum	Tg	IDA		Rat	PMID:3305703|RGD:1600144
Cellular Component	GO:0005576	extracellular region	tg	IDA		Zfish	PMID:27311711
Cellular Component	GO:0005615	extracellular space	TG	IDA		Human	PMID:11082042
Cellular Component	GO:0005615	extracellular space	TG	IDA		Human	PMID:8626858
Cellular Component	GO:0005615	extracellular space	Tg	IDA		Mouse	MGI:MGI:2664014|PMID:12782676
Cellular Component	GO:0005615	extracellular space	Tg	IDA		Mouse	MGI:MGI:6377840|PMID:19276074
Cellular Component	GO:0005615	extracellular space	Tg	IDA		Rat	PMID:16648292|RGD:1600146
Cellular Component	GO:0005794	Golgi apparatus	Tg	IDA		Rat	PMID:3305703|RGD:1600144
Cellular Component	GO:0048471	perinuclear region of cytoplasm	Tg	IDA		Rat	PMID:3305703|RGD:1600144
Cellular Component	GO:0032991	protein-containing complex	Tg	IDA		Rat	PMID:12401114|RGD:7205668
Biological Process	GO:0015705	iodide transport	Tg	IMP	MGI:MGI:1856829	Mouse	PMID:3803305
Biological Process	GO:0031641	regulation of myelination	Tg	IMP	MGI:MGI:1856829	Mouse	PMID:1508304
Biological Process	GO:0032496	response to lipopolysaccharide	Tg	IEP		Rat	PMID:16627577|RGD:1600142
Biological Process	GO:0009268	response to pH	Tg	IDA		Rat	PMID:12809172|RGD:1600143
Biological Process	GO:0030878	thyroid gland development	TG	IEP		Human	PMID:15494458
Biological Process	GO:0006590	thyroid hormone generation	TG	IDA		Human	PMID:32025030
Biological Process	GO:0006590	thyroid hormone generation	Tg	IDA		Mouse	MGI:MGI:2664014|PMID:12782676
Biological Process	GO:0006590	thyroid hormone generation	Tg	IDA		Rat	PMID:3953233|RGD:1600150
Biological Process	GO:0042403	thyroid hormone metabolic process	Tg	IMP	MGI:MGI:1856829	Mouse	PMID:3803305
Biological Process	GO:0045056	transcytosis	Tg	IDA		Rat	PMID:12809172|RGD:1600143

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern