Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes SUPV3L1
  • Mouse genes Supv3l1
  • Rat genes Supv3l1
  • Zfish genes supv3l1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Supv3l1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0034458	3'-5' RNA helicase activity	SUPV3L1	IDA		Human	PMID:19509288
Molecular Function	GO:0003677	DNA binding	SUPV3L1	IMP		Human	PMID:12466530
Molecular Function	GO:0003678	DNA helicase activity	SUPV3L1	IMP		Human	PMID:12466530
Molecular Function	GO:0003725	double-stranded RNA binding	SUPV3L1	IDA		Human	PMID:19509288
Molecular Function	GO:0042802	identical protein binding	SUPV3L1	IPI	UniProtKB:Q8IYB8	Human	PMID:19509288
Molecular Function	GO:0005515	protein binding	SUPV3L1	IPI	UniProtKB:P54132	Human	PMID:17961633
Molecular Function	GO:0005515	protein binding	SUPV3L1	IPI	UniProtKB:Q14191	Human	PMID:17961633
Molecular Function	GO:0005515	protein binding	SUPV3L1	IPI	UniProtKB:Q8TCS8	Human	PMID:19509288
Molecular Function	GO:0005515	protein binding	SUPV3L1	IPI	UniProtKB:Q9BRK4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	SUPV3L1	IPI	UniProtKB:Q8TCS8	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	SUPV3L1	IPI	UniProtKB:Q12849	Human	PMID:29967381
Molecular Function	GO:0005515	protein binding	SUPV3L1	IPI	UniProtKB:Q8N7X4	Human	PMID:32296183
Molecular Function	GO:0042803	protein homodimerization activity	SUPV3L1	IPI	UniProtKB:Q8IYB8	Human	PMID:19509288
Molecular Function	GO:0003723	RNA binding	SUPV3L1	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	SUPV3L1	HDA		Human	PMID:22681889
Molecular Function	GO:0003724	RNA helicase activity	SUPV3L1	IDA		Human	PMID:19509288
Cellular Component	GO:0045025	mitochondrial degradosome	SUPV3L1	IDA		Human	PMID:19509288
Cellular Component	GO:0045025	mitochondrial degradosome	SUPV3L1	IDA		Human	PMID:29967381
Cellular Component	GO:0005759	mitochondrial matrix	SUPV3L1	IDA		Human	PMID:12466530
Cellular Component	GO:0042645	mitochondrial nucleoid	SUPV3L1	IDA		Human	PMID:18063578
Cellular Component	GO:0005739	mitochondrion	SUPV3L1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005739	mitochondrion	SUPV3L1	IDA		Human	PMID:17352692
Cellular Component	GO:0005739	mitochondrion	SUPV3L1	IDA		Human	PMID:19864255
Cellular Component	GO:0005739	mitochondrion	Supv3l1	HDA		Mouse	PMID:18614015
Cellular Component	GO:0005634	nucleus	SUPV3L1	IDA		Human	PMID:17352692
Biological Process	GO:0032508	DNA duplex unwinding	SUPV3L1	IMP		Human	PMID:12466530
Biological Process	GO:0006310	DNA recombination	SUPV3L1	IMP		Human	PMID:17961633
Biological Process	GO:0001889	liver development	supv3l1	IMP		Zfish	PMID:22908272
Biological Process	GO:0000958	mitochondrial mRNA catabolic process	SUPV3L1	IMP		Human	PMID:19864255
Biological Process	GO:0035946	mitochondrial mRNA surveillance	SUPV3L1	IMP		Human	PMID:19864255
Biological Process	GO:0035945	mitochondrial ncRNA surveillance	SUPV3L1	IMP		Human	PMID:19864255
Biological Process	GO:0000965	mitochondrial RNA 3'-end processing	SUPV3L1	IMP		Human	PMID:19864255
Biological Process	GO:2000827	mitochondrial RNA surveillance	SUPV3L1	IMP		Human	PMID:19864255
Biological Process	GO:0070584	mitochondrion morphogenesis	SUPV3L1	IMP		Human	PMID:19864255
Biological Process	GO:0043066	negative regulation of apoptotic process	SUPV3L1	IMP		Human	PMID:17352692
Biological Process	GO:0030307	positive regulation of cell growth	SUPV3L1	IMP		Human	PMID:19864255
Biological Process	GO:0000962	positive regulation of mitochondrial RNA catabolic process	SUPV3L1	IDA		Human	PMID:19509288
Biological Process	GO:0000962	positive regulation of mitochondrial RNA catabolic process	SUPV3L1	IMP		Human	PMID:19864255
Biological Process	GO:0000962	positive regulation of mitochondrial RNA catabolic process	SUPV3L1	IDA		Human	PMID:29967381
Biological Process	GO:0006401	RNA catabolic process	SUPV3L1	IMP		Human	PMID:18678873

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern