Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RXRG
  • Mouse genes Rxrg
  • Rat genes Rxrg
  • Zfish genes rxrga,rxrgb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rxrg

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0140693	molecular condensate scaffold activity	RXRG	IDA		Human	PMID:31881311
Molecular Function	GO:0004879	nuclear receptor activity	Rxrg	IDA		Mouse	PMID:1312497
Molecular Function	GO:0004879	nuclear receptor activity	rxrga	IDA		Zfish	PMID:7565671
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:P10276	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:Q91XC0	Human	PMID:20133701
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:P10276	Human	PMID:20211142
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:P55055	Human	PMID:20211142
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:P10276	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:Q13133	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:P55055	Human	PMID:21900206
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:P10276	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:P10276	Human	PMID:25303530
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:F1D8P7	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:P10276	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:P10276-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:P10826-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:Q13133	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:Q15777	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:F1D8P7	Human	PMID:25910212
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:P10276-2	Human	PMID:25910212
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:Q13133-3	Human	PMID:25910212
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:P55055	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:P10276	Human	PMID:29892012
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:P10276	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:P10826-2	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:P55055	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:Q13133	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:F1D8P7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:P10276	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:P10826-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:P11473-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:P12532	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:P13631	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:Q13133-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:Q15777	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:Q96RI1-1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:Q9NRD5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:G5E9A7	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:O14908-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:P02489	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:Q14204	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:Q7Z699	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	RXRG	IPI	UniProtKB:Q86WV8	Human	PMID:32814053
Molecular Function	GO:0043565	sequence-specific DNA binding	Rxrg	IGI	MGI:MGI:97857	Mouse	PMID:7823919
Molecular Function	GO:0043565	sequence-specific DNA binding	Rxrg	IGI	MGI:MGI:97856	Mouse	PMID:7823919
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	RXRG	IDA		Human	PMID:28473536
Cellular Component	GO:0005634	nucleus	Rxrg	IDA		Rat	PMID:15664689|RGD:2325974
Biological Process	GO:0032870	cellular response to hormone stimulus	Rxrg	IEP		Rat	PMID:10328854|RGD:2325975
Biological Process	GO:0006351	DNA-templated transcription	Rxrg	IDA		Mouse	MGI:MGI:50850|PMID:1312497
Biological Process	GO:0006354	DNA-templated transcription elongation	rxrga	IDA		Zfish	PMID:7565671|ZFIN:ZDB-PUB-961014-511
Biological Process	GO:0007507	heart development	Rxrg	IEP		Rat	PMID:10328854|RGD:2325975
Biological Process	GO:0030522	intracellular receptor signaling pathway	Rxrg	IDA		Mouse	MGI:MGI:50850|PMID:1312497
Biological Process	GO:0030522	intracellular receptor signaling pathway	rxrga	IDA		Zfish	PMID:7565671|ZFIN:ZDB-PUB-961014-511
Biological Process	GO:0030182	neuron differentiation	Rxrg	IEP		Rat	PMID:15664689|RGD:2325974
Biological Process	GO:0007422	peripheral nervous system development	Rxrg	IEP		Rat	PMID:9682978|RGD:2325977
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	rxrga	IDA		Zfish	PMID:7565671|ZFIN:ZDB-PUB-961014-511
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Rxrg	IGI	MGI:MGI:97856	Mouse	PMID:7823919
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Rxrg	IGI	MGI:MGI:97857	Mouse	PMID:7823919
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	rxrga	IDA		Zfish	PMID:7565671|ZFIN:ZDB-PUB-961014-511
Biological Process	GO:0031641	regulation of myelination	Rxrg	IDA		Rat	PMID:20648638|RGD:6771320
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	Rxrg	IDA		Mouse	MGI:MGI:50850|PMID:1312497
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	rxrga	IDA		Zfish	PMID:7565671|ZFIN:ZDB-PUB-961014-511
Biological Process	GO:0014070	response to organic cyclic compound	Rxrg	IEP		Rat	PMID:18923996|RGD:2317622
Biological Process	GO:0032526	response to retinoic acid	Rxrg	IEP		Rat	PMID:17161848|RGD:2325973
Biological Process	GO:0048384	retinoic acid receptor signaling pathway	Rxrg	IDA		Mouse	PMID:1312497
Biological Process	GO:0007519	skeletal muscle tissue development	Rxrg	IEP		Rat	PMID:9389449|RGD:633976

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern