Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RPGRIP1L
  • Mouse genes Rpgrip1l
  • Rat genes Rpgrip1l
  • Zfish genes rpgrip1l
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rpgrip1l

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	RPGRIP1L	IPI	UniProtKB:Q92834	Human	PMID:19430481
Molecular Function	GO:0005515	protein binding	RPGRIP1L	IPI	UniProtKB:Q9R0X5	Human	PMID:19430481
Molecular Function	GO:0005515	protein binding	RPGRIP1L	IPI	UniProtKB:O75161	Human	PMID:21565611
Molecular Function	GO:0005515	protein binding	RPGRIP1L	IPI	UniProtKB:Q15051	Human	PMID:21565611
Molecular Function	GO:0005515	protein binding	Rpgrip1l	IPI	UniProtKB:P59240|UniProtKB:Q8BP00	Mouse	MGI:MGI:5013991|PMID:21565611
Molecular Function	GO:0031870	thromboxane A2 receptor binding	RPGRIP1L	IPI	UniProtKB:P21731	Human	PMID:19464661
Cellular Component	GO:0005879	axonemal microtubule	Rpgrip1l	IDA		Rat	PMID:17558407|RGD:11537356
Cellular Component	GO:0005930	axoneme	RPGRIP1L	IDA		Human	PMID:17558409
Cellular Component	GO:0005911	cell-cell junction	RPGRIP1L	IDA		Human	PMID:21565611
Cellular Component	GO:0005813	centrosome	RPGRIP1L	IDA		Human	PMID:17558409
Cellular Component	GO:0005813	centrosome	RPGRIP1L	IDA		Human	PMID:21399614
Cellular Component	GO:0036064	ciliary basal body	RPGRIP1L	IDA		Human	PMID:17558409
Cellular Component	GO:0036064	ciliary basal body	Rpgrip1l	IDA		Mouse	PMID:17553904
Cellular Component	GO:0036064	ciliary basal body	Rpgrip1l	IDA		Rat	PMID:17558407|RGD:11537356
Cellular Component	GO:0035253	ciliary rootlet	Rpgrip1l	IDA		Rat	PMID:21685204|RGD:13204813
Cellular Component	GO:0035869	ciliary transition zone	RPGRIP1L	IDA		Human	PMID:26595381
Cellular Component	GO:0035869	ciliary transition zone	Rpgrip1l	IDA		Mouse	PMID:29487109
Cellular Component	GO:0035869	ciliary transition zone	Rpgrip1l	IDA		Mouse	PMID:22927466
Cellular Component	GO:0035869	ciliary transition zone	Rpgrip1l	IDA		Rat	PMID:21685204|RGD:13204813
Cellular Component	GO:0005929	cilium	RPGRIP1L	IDA		Human	PMID:17558409
Cellular Component	GO:0005737	cytoplasm	RPGRIP1L	IDA		Human	PMID:17558409
Cellular Component	GO:0005737	cytoplasm	Rpgrip1l	IDA		Mouse	MGI:MGI:5013991|PMID:21565611
Cellular Component	GO:0005829	cytosol	RPGRIP1L	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	RPGRIP1L	IDA		Human	GO_REF:0000052
Cellular Component	GO:0032391	photoreceptor connecting cilium	Rpgrip1l	IDA		Rat	PMID:17558407|RGD:11537356
Cellular Component	GO:0005886	plasma membrane	RPGRIP1L	IDA		Human	GO_REF:0000052
Biological Process	GO:0007420	brain development	Rpgrip1l	IMP	MGI:MGI:3716208	Mouse	PMID:17553904
Biological Process	GO:0007420	brain development	Rpgrip1l	IMP	MGI:MGI:3716208	Mouse	PMID:17558409
Biological Process	GO:0043010	camera-type eye development	Rpgrip1l	IMP	MGI:MGI:3716208	Mouse	PMID:17553904
Biological Process	GO:0043010	camera-type eye development	Rpgrip1l	IMP	MGI:MGI:3716208	Mouse	PMID:17558409
Biological Process	GO:0021549	cerebellum development	Rpgrip1l	IMP	MGI:MGI:3716208	Mouse	PMID:17558409
Biological Process	GO:0060271	cilium assembly	Rpgrip1l	IMP	MGI:MGI:3716208	Mouse	PMID:17553904
Biological Process	GO:0090102	cochlea development	Rpgrip1l	IMP	MGI:MGI:3716208	Mouse	PMID:22927466
Biological Process	GO:0022038	corpus callosum development	Rpgrip1l	IMP	MGI:MGI:3716208	Mouse	PMID:17558409
Biological Process	GO:0007368	determination of left/right symmetry	Rpgrip1l	IMP	MGI:MGI:3716208	Mouse	PMID:17553904
Biological Process	GO:0035115	embryonic forelimb morphogenesis	Rpgrip1l	IMP	MGI:MGI:3716208	Mouse	PMID:17553904
Biological Process	GO:0035116	embryonic hindlimb morphogenesis	Rpgrip1l	IMP	MGI:MGI:3716208	Mouse	PMID:17553904
Biological Process	GO:0009880	embryonic pattern specification	rpgrip1l	IMP	ZFIN:ZDB-MRPHLNO-100324-2	Zfish	PMID:19430481
Biological Process	GO:0001736	establishment of planar polarity	Rpgrip1l	IMP	MGI:MGI:3716208	Mouse	PMID:22927466
Biological Process	GO:0007163	establishment or maintenance of cell polarity	Rpgrip1l	IMP		Mouse	PMID:22832925
Biological Process	GO:0060322	head development	Rpgrip1l	IMP	MGI:MGI:3716208	Mouse	PMID:17553904
Biological Process	GO:0001701	in utero embryonic development	Rpgrip1l	IMP	MGI:MGI:3716208	Mouse	PMID:17553904
Biological Process	GO:0001822	kidney development	Rpgrip1l	IMP	MGI:MGI:3716208	Mouse	PMID:17558409
Biological Process	GO:0021670	lateral ventricle development	Rpgrip1l	IMP	MGI:MGI:3716208	Mouse	PMID:17558409
Biological Process	GO:0035108	limb morphogenesis	Rpgrip1l	IMP	MGI:MGI:3716208	Mouse	PMID:17558409
Biological Process	GO:0001889	liver development	Rpgrip1l	IMP	MGI:MGI:3716208	Mouse	PMID:17558409
Biological Process	GO:0045744	negative regulation of G protein-coupled receptor signaling pathway	RPGRIP1L	IDA		Human	PMID:19464661
Biological Process	GO:0021532	neural tube patterning	Rpgrip1l	IMP	MGI:MGI:3716208	Mouse	PMID:17553904
Biological Process	GO:1905515	non-motile cilium assembly	Rpgrip1l	IMP		Mouse	PMID:22832925
Biological Process	GO:0043584	nose development	Rpgrip1l	IMP	MGI:MGI:3716208	Mouse	PMID:17553904
Biological Process	GO:0021772	olfactory bulb development	Rpgrip1l	IMP	MGI:MGI:3716208	Mouse	PMID:17558409
Biological Process	GO:0060039	pericardium development	Rpgrip1l	IMP	MGI:MGI:3716208	Mouse	PMID:17553904
Biological Process	GO:0008589	regulation of smoothened signaling pathway	Rpgrip1l	IMP	MGI:MGI:3716208	Mouse	PMID:17553904
Biological Process	GO:0021537	telencephalon development	Rpgrip1l	IMP	MGI:MGI:3716208	Mouse	PMID:17558409

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern