Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes RBBP8
  • Mouse genes Rbbp8
  • Rat genes Rbbp8
  • Zfish genes rbbp8
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Rbbp8

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003684	damaged DNA binding	RBBP8	IDA		Human	PMID:18716619
Molecular Function	GO:0042802	identical protein binding	RBBP8	IPI	UniProtKB:Q99708	Human	PMID:25558984
Molecular Function	GO:0005515	protein binding	RBBP8	IPI	UniProtKB:P06400	Human	PMID:10779361
Molecular Function	GO:0005515	protein binding	RBBP8	IPI	UniProtKB:P38398	Human	PMID:11739404
Molecular Function	GO:0005515	protein binding	RBBP8	IPI	UniProtKB:P61969	Human	PMID:11751867
Molecular Function	GO:0005515	protein binding	RBBP8	IPI	UniProtKB:Q13363	Human	PMID:16287852
Molecular Function	GO:0005515	protein binding	RBBP8	IPI	UniProtKB:P38398	Human	PMID:17525340
Molecular Function	GO:0005515	protein binding	RBBP8	IPI	UniProtKB:P38398	Human	PMID:18285836
Molecular Function	GO:0005515	protein binding	RBBP8	IPI	UniProtKB:P38398	Human	PMID:18716619
Molecular Function	GO:0005515	protein binding	RBBP8	IPI	UniProtKB:P49959	Human	PMID:18716619
Molecular Function	GO:0005515	protein binding	RBBP8	IPI	UniProtKB:Q92878	Human	PMID:18716619
Molecular Function	GO:0005515	protein binding	RBBP8	IPI	UniProtKB:P38398	Human	PMID:19369211
Molecular Function	GO:0005515	protein binding	RBBP8	IPI	UniProtKB:O60934	Human	PMID:19759395
Molecular Function	GO:0005515	protein binding	RBBP8	IPI	UniProtKB:P49959	Human	PMID:21052091
Molecular Function	GO:0005515	protein binding	RBBP8	IPI	UniProtKB:Q9UQ84	Human	PMID:21052091
Molecular Function	GO:0005515	protein binding	RBBP8	IPI	UniProtKB:O60934	Human	PMID:22565321
Molecular Function	GO:0005515	protein binding	RBBP8	IPI	UniProtKB:O75475	Human	PMID:22773103
Molecular Function	GO:0005515	protein binding	RBBP8	IPI	UniProtKB:P06400	Human	PMID:22773103
Molecular Function	GO:0005515	protein binding	RBBP8	IPI	UniProtKB:O60934	Human	PMID:25558984
Molecular Function	GO:0005515	protein binding	RBBP8	IPI	UniProtKB:P49959	Human	PMID:25558984
Molecular Function	GO:0005515	protein binding	RBBP8	IPI	UniProtKB:Q7Z4V5	Human	PMID:26721387
Molecular Function	GO:0005515	protein binding	RBBP8	IPI	UniProtKB:P38398,UniProtKB:P49959,UniProtKB:Q9NVH0	Human	PMID:26807646
Molecular Function	GO:0005515	protein binding	RBBP8	IPI	UniProtKB:P49959	Human	PMID:26807646
Molecular Function	GO:0005515	protein binding	RBBP8	IPI	UniProtKB:Q9NVH0	Human	PMID:26807646
Molecular Function	GO:0005515	protein binding	RBBP8	IPI	UniProtKB:Q9UQ84	Human	PMID:26807646
Molecular Function	GO:0005515	protein binding	RBBP8	IPI	UniProtKB:Q13618	Human	PMID:27561354
Molecular Function	GO:0005515	protein binding	RBBP8	IPI	UniProtKB:Q96M94	Human	PMID:27561354
Molecular Function	GO:0005515	protein binding	RBBP8	IPI	UniProtKB:Q9Y3Z3	Human	PMID:28834754
Molecular Function	GO:0005515	protein binding	RBBP8	IPI	UniProtKB:Q9H7T9	Human	PMID:29042561
Molecular Function	GO:0005515	protein binding	RBBP8	IPI	UniProtKB:P38398	Human	PMID:29656893
Molecular Function	GO:0005515	protein binding	RBBP8	IPI	UniProtKB:P38398	Human	PMID:34591612
Molecular Function	GO:0005515	protein binding	RBBP8	IPI	UniProtKB:P38398	Human	PMID:9811458
Molecular Function	GO:0061629	RNA polymerase II-specific DNA-binding transcription factor binding	RBBP8	IPI	UniProtKB:Q96T58	Human	PMID:16287852
Molecular Function	GO:0000014	single-stranded DNA endodeoxyribonuclease activity	RBBP8	IMP		Human	PMID:18716619
Molecular Function	GO:0000014	single-stranded DNA endodeoxyribonuclease activity	RBBP8	IMP		Human	PMID:19202191
Molecular Function	GO:0003714	transcription corepressor activity	RBBP8	IDA		Human	PMID:16287852
Cellular Component	GO:0070533	BRCA1-C complex	RBBP8	IPI		Human	PMID:16391231
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	RBBP8	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	RBBP8	IDA		Human	GO_REF:0000052
Cellular Component	GO:0017053	transcription repressor complex	RBBP8	IDA		Human	PMID:16287852
Biological Process	GO:0001835	blastocyst hatching	Rbbp8	IMP	MGI:MGI:3577029	Mouse	PMID:15831459
Biological Process	GO:0010792	DNA double-strand break processing involved in repair via single-strand annealing	RBBP8	IMP		Human	PMID:18716619
Biological Process	GO:0010792	DNA double-strand break processing involved in repair via single-strand annealing	RBBP8	IMP		Human	PMID:19202191
Biological Process	GO:0000724	double-strand break repair via homologous recombination	RBBP8	IMP		Human	PMID:26721387
Biological Process	GO:0000082	G1/S transition of mitotic cell cycle	Rbbp8	IMP	MGI:MGI:3577029	Mouse	PMID:15831459
Biological Process	GO:0032355	response to estradiol	Rbbp8	IEP		Rat	PMID:15473135|RGD:9491753

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern