Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PTPRG
  • Mouse genes Ptprg
  • Rat genes Ptprg
  • Zfish genes ca16b,ptprga
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ptprg

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	PTPRG	IPI	UniProtKB:P23470	Human	PMID:19167335
Molecular Function	GO:0005515	protein binding	PTPRG	IPI	UniProtKB:P35222	Human	PMID:19167335
Molecular Function	GO:0005515	protein binding	PTPRG	IPI	UniProtKB:P35222	Human	PMID:21112398
Molecular Function	GO:0005515	protein binding	PTPRG	IPI	UniProtKB:P00533	Human	PMID:25970784
Molecular Function	GO:0005515	protein binding	PTPRG	IPI	UniProtKB:P00533	Human	PMID:31980649
Molecular Function	GO:0004725	protein tyrosine phosphatase activity	PTPRG	IDA		Human	PMID:19167335
Cellular Component	GO:0070062	extracellular exosome	PTPRG	HDA		Human	PMID:23533145
Cellular Component	GO:0005615	extracellular space	Ptprg	IDA		Rat	PMID:9016795|RGD:633859
Biological Process	GO:0007420	brain development	Ptprg	IEP		Rat	PMID:9016795|RGD:633859
Biological Process	GO:0010633	negative regulation of epithelial cell migration	PTPRG	IMP		Human	PMID:21724833
Biological Process	GO:0010977	negative regulation of neuron projection development	Ptprg	IDA		Rat	PMID:11173927|RGD:633860
Biological Process	GO:1901998	toxin transport	Ptprg	IMP		Mouse	PMID:23716698

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern