Comparative GO Graph (mouse, human, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes MIR140
  • Mouse genes Mir140
  • Rat genes
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Mir140

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Cellular Component	GO:0016442	RISC complex	Mir140	IDA		Mouse	PMID:23185045
Biological Process	GO:0051216	cartilage development	Mir140	IMP	MGI:MGI:4461000	Mouse	PMID:20466812
Biological Process	GO:0071222	cellular response to lipopolysaccharide	Mir140	IDA		Mouse	PMID:18762567
Biological Process	GO:0090398	cellular senescence	Mir140	IDA		Mouse	PMID:25751060
Biological Process	GO:0042552	myelination	Mir140	IDA		Mouse	PMID:20805985
Biological Process	GO:0010629	negative regulation of gene expression	Mir140	IDA		Mouse	PMID:24349493
Biological Process	GO:0010468	regulation of gene expression	Mir140	IGI	MGI:MGI:1352451	Mouse	PMID:24349493
Biological Process	GO:0009617	response to bacterium	Mir140	IEP		Mouse	PMID:24205035
Biological Process	GO:0070482	response to oxygen levels	Mir140	IDA		Mouse	PMID:18723672
Biological Process	GO:0007605	sensory perception of sound	Mir140	IEP		Mouse	PMID:23646144
Biological Process	GO:0001501	skeletal system development	Mir140	IMP	MGI:MGI:4461000	Mouse	PMID:20466812
Biological Process	GO:0001894	tissue homeostasis	Mir140	IMP	MGI:MGI:4461000	Mouse	PMID:20466812

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern