Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes C2CD3
  • Mouse genes C2cd3
  • Rat genes C2cd3
  • Zfish genes c2cd3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set C2cd3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	C2CD3	IPI	UniProtKB:O75665	Human	PMID:24997988
Molecular Function	GO:0005515	protein binding	C2CD3	IPI	UniProtKB:O75665	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	C2cd3	IPI	PR:Q61371	Mouse	PMID:24469809
Molecular Function	GO:0005515	protein binding	C2cd3	IPI	PR:Q9R0L6	Mouse	PMID:24469809
Molecular Function	GO:0005515	protein binding	C2cd3	IPI	PR:Q8C1Z7	Mouse	PMID:24469809
Cellular Component	GO:0034451	centriolar satellite	C2CD3	IDA		Human	PMID:24997988
Cellular Component	GO:0034451	centriolar satellite	C2cd3	IDA		Mouse	PMID:24469809
Cellular Component	GO:0005814	centriole	C2CD3	IDA		Human	PMID:23769972
Cellular Component	GO:0005814	centriole	C2cd3	IDA		Mouse	PMID:24469809
Cellular Component	GO:0005813	centrosome	C2CD3	IDA		Human	PMID:21399614
Cellular Component	GO:0036064	ciliary basal body	C2cd3	IDA		Mouse	PMID:19004860
Biological Process	GO:0007420	brain development	C2cd3	IMP		Mouse	PMID:19004860
Biological Process	GO:0061511	centriole elongation	C2CD3	IDA		Human	PMID:24997988
Biological Process	GO:0061511	centriole elongation	C2cd3	IDA		Mouse	MGI:MGI:5585526|PMID:24997988
Biological Process	GO:0060271	cilium assembly	C2cd3	IMP		Mouse	PMID:19004860
Biological Process	GO:0042733	embryonic digit morphogenesis	C2cd3	IMP		Mouse	PMID:19004860
Biological Process	GO:0030326	embryonic limb morphogenesis	C2cd3	IMP		Mouse	PMID:19004860
Biological Process	GO:0001947	heart looping	C2cd3	IMP		Mouse	PMID:19004860
Biological Process	GO:0001701	in utero embryonic development	C2cd3	IMP		Mouse	PMID:19004860
Biological Process	GO:0021997	neural plate axis specification	C2cd3	IMP		Mouse	PMID:19004860
Biological Process	GO:0021915	neural tube development	C2cd3	IMP		Mouse	PMID:19004860
Biological Process	GO:1905515	non-motile cilium assembly	C2CD3	IMP		Human	PMID:23769972
Biological Process	GO:0007389	pattern specification process	C2cd3	IMP		Mouse	PMID:19004860
Biological Process	GO:0071539	protein localization to centrosome	C2CD3	IDA		Human	PMID:24997988
Biological Process	GO:0071539	protein localization to centrosome	C2cd3	IMP	MGI:MGI:3836403	Mouse	PMID:24469809
Biological Process	GO:0016485	protein processing	C2cd3	IMP		Mouse	PMID:19004860
Biological Process	GO:0030162	regulation of proteolysis	C2cd3	IDA		Mouse	PMID:19004860
Biological Process	GO:0008589	regulation of smoothened signaling pathway	C2cd3	IGI	MGI:MGI:99833	Mouse	PMID:19004860
Biological Process	GO:0008589	regulation of smoothened signaling pathway	C2cd3	IGI	MGI:MGI:105373	Mouse	PMID:19004860
Biological Process	GO:0008589	regulation of smoothened signaling pathway	C2cd3	IMP		Mouse	PMID:19004860

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern