About   Help   FAQ
Phenotypes associated with this allele
Allele Symbol
Allele Name
Allele ID
Irf6+
wild type
MGI:2439164
Summary 6 genotypes
Jump to Allelic Composition Genetic Background Genotype ID
ht1
\Irf6tm1Mjd/\Irf6+ involves: 129S1/Sv * 129X1/SvJ * C57BL/6 MGI:3693809
ht2
\Irf6Gt(OST398253)Lex/\Irf6+ involves: 129S5/SvEvBrd * C57BL/6 MGI:5697285
cx3
\Irf6tm1Mjd/\Irf6+
\SfnEr/\SfnEr
involves: 129S1/Sv * 129X1/SvJ MGI:5426899
cx4
\Chuktm1Mka/\Chuktm1Mka
\Irf6tm1Mjd/\Irf6+
involves: 129S1/Sv * 129X1/SvJ * C57BL/6 MGI:5426902
cx5
\Irf6tm1Mjd/\Irf6+
\SfnEr/\Sfn+
involves: 129S1/Sv * 129X1/SvJ * C57BL/6 MGI:3693811
cx6
\Grhl3tm1Bogi/\Grhl3+
\Irf6Gt(OST398253)Lex/\Irf6+
involves: 129S5/SvEvBrd * C57BL/6 * C57BL/6J MGI:5697287


Genotype
MGI:3693809
ht1
Allelic
Composition
\Irf6tm1Mjd/\Irf6+
Genetic
Background
involves: 129S1/Sv * 129X1/SvJ * C57BL/6
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Irf6tm1Mjd mutation (0 available); any Irf6 mutation (24 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
mortality/aging
• only 37% (~50% expected) of live offspring of wild-type/heterozygous matings are heterozygous; adhesions prevent mouth opening, resulting in death immediately after birth

craniofacial
• 89% of E12-E16 mice examined have mild intraoral adhesions between epithelia of mouth floor and ventral surface of tongue
• similar adhesions are observed between maxilla and mandible in molar tooth germ region
• most adhesions break after development of spontaneous oral movements, in severely affected mice, death after birth results; severely affected mice show multiple intraoral adhesions

growth/size/body
• 89% of E12-E16 mice examined have mild intraoral adhesions between epithelia of mouth floor and ventral surface of tongue
• similar adhesions are observed between maxilla and mandible in molar tooth germ region
• most adhesions break after development of spontaneous oral movements, in severely affected mice, death after birth results; severely affected mice show multiple intraoral adhesions

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
popliteal pterygium syndrome DOID:0060055 OMIM:119500
OMIM:263650
J:116077




Genotype
MGI:5697285
ht2
Allelic
Composition
\Irf6Gt(OST398253)Lex/\Irf6+
Genetic
Background
involves: 129S5/SvEvBrd * C57BL/6
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Irf6Gt(OST398253)Lex mutation (1 available); any Irf6 mutation (24 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
craniofacial
• bilateral oral adhesions (which have a loss of periderm) at the tooth germ sites are seen at E13.5
• oral adhesions occur most frequently between the mandible and maxilla
• expression of p63 is reduced, indicating loss of basal epithelial cells at sites of the oral fusions

embryo
• expression of Krt6, a marker for the periderm, is reduced, indicating loss of oral periderm cells




Genotype
MGI:5426899
cx3
Allelic
Composition
\Irf6tm1Mjd/\Irf6+
\SfnEr/\SfnEr
Genetic
Background
involves: 129S1/Sv * 129X1/SvJ
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Irf6tm1Mjd mutation (0 available); any Irf6 mutation (24 available)
SfnEr mutation (1 available); any Sfn mutation (13 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
craniofacial
N
• mice exhibit normal teeth and molar tooth germ




Genotype
MGI:5426902
cx4
Allelic
Composition
\Chuktm1Mka/\Chuktm1Mka
\Irf6tm1Mjd/\Irf6+
Genetic
Background
involves: 129S1/Sv * 129X1/SvJ * C57BL/6
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Chuktm1Mka mutation (0 available); any Chuk mutation (51 available)
Irf6tm1Mjd mutation (0 available); any Irf6 mutation (24 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
craniofacial
• the evaginating incisor phenotype is neither attenuated or worsened compared with Chuktm1Mka homozygotes

growth/size/body
• the evaginating incisor phenotype is neither attenuated or worsened compared with Chuktm1Mka homozygotes

skeleton
• the evaginating incisor phenotype is neither attenuated or worsened compared with Chuktm1Mka homozygotes




Genotype
MGI:3693811
cx5
Allelic
Composition
\Irf6tm1Mjd/\Irf6+
\SfnEr/\Sfn+
Genetic
Background
involves: 129S1/Sv * 129X1/SvJ * C57BL/6
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Irf6tm1Mjd mutation (0 available); any Irf6 mutation (24 available)
SfnEr mutation (1 available); any Sfn mutation (13 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
craniofacial
• severe intraoral adhesions prevent opening of mouth at E17
• seen at E17

limbs/digits/tail
• affected pups show forepaw and hindpaw syndactyly
• at E17

digestive/alimentary system
• seen at E17
• fused esophagus is found at E17

integument
• at E17, affected pups have smooth skin
• epidermis is hyperproliferative
• areas of keratinization are frequently detected within and sometimes on surface of expanded suprabasal layers
• mutants have thickened epithelium resulting from expanded stratum spinosum; clearly defined stratum granulosum and stratum corneum do not form toward epidermal surface

growth/size/body
• severe intraoral adhesions prevent opening of mouth at E17
• seen at E17
• at E17, partial fusion of hindlimbs and tail to body wall is observed




Genotype
MGI:5697287
cx6
Allelic
Composition
\Grhl3tm1Bogi/\Grhl3+
\Irf6Gt(OST398253)Lex/\Irf6+
Genetic
Background
involves: 129S5/SvEvBrd * C57BL/6 * C57BL/6J
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Grhl3tm1Bogi mutation (0 available); any Grhl3 mutation (53 available)
Irf6Gt(OST398253)Lex mutation (1 available); any Irf6 mutation (24 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
mortality/aging
• fewer than the expected numbers of mutants are seen at P21
• 12% rate of resorbing embryos

craniofacial
• oral adhesions at areas superficial to the tooth germ and oral adhesions (which have a loss of periderm) and fusions (which have a loss of both the periderm and the basal epithelial layers) posterior to the tooth germ

embryo
• expression of Krt6, a marker for the periderm, is reduced more than in either single heterozygote, indicating loss of oral periderm cells





Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/25/2025
MGI 6.24
The Jackson Laboratory