About   Help   FAQ
Lrrk1 Gene Detail
Summary
  • Symbol
    Lrrk1
  • Name
    leucine-rich repeat kinase 1
  • Synonyms
    C230002E15Rik, D130026O16Rik, mKIAA1790
  • Feature Type
    protein coding gene
  • IDs
    MGI:2142227
    NCBI Gene: 233328
  • Alliance
    genome feature page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:65908493-66038089 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 35.57 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    4785 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2142227
 protein coding gene Chr7:65876660-66038098 (-)
129S1/SvImJ ENSMUSG00200011823
 protein coding gene Chr7:52624935-52746486 (-)
A/J ENSMUSG00195012378
 protein coding gene Chr7:57048105-57169655 (-)
AKR/J ENSMUSG00220019656
 protein coding gene Chr7:50550172-50671723 (-)
BALB/cJ ENSMUSG00180004254
 protein coding gene Chr7:53752742-53882214 (-)
C3H/HeJ ENSMUSG00175010253
 protein coding gene Chr7:54551931-54673476 (-)
C57BL/6NJ ENSMUSG00215012610
 protein coding gene Chr7:53684688-53814563 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029841
 protein coding gene Chr7:68967317-69130826 (-)
CAST/EiJ ENSTCUG00005012053
 protein coding gene Chr7:57225583-57354629 (-)
CBA/J ENSMUSG00210019839
 protein coding gene Chr7:54390433-54511986 (-)
DBA/2J ENSMUSG00185005649
 protein coding gene Chr7:58716889-58848025 (-)
FVB/NJ ENSMUSG00205004137
 protein coding gene Chr7:54386339-54514314 (-)
JF1/MsJ ENSUMUG00000006982
 protein coding gene Chr7:63463148-63594307 (-)
LP/J ENSMUSG00230018175
 protein coding gene Chr7:64807848-64935732 (-)
NOD/ShiLtJ ENSMUSG00190006949
 protein coding gene Chr7:54498699-54620251 (-)
NZO/HlLtJ ENSMUSG00225016326
 protein coding gene Chr7:63090609-63219217 (-)
PWK/PhJ ENSLUMG00010018337
 protein coding gene Chr7:53002543-53133080 (-)
SPRET/EiJ ENSMSPG00010003225
 protein coding gene Chr7:53382464-53513673 (-)
WSB/EiJ ENSIUOG00005004656
 protein coding gene Chr7:54933102-55056770 (-)



Homology
more
  • Human Ortholog
    LRRK1, leucine rich repeat kinase 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    LRRK1, leucine rich repeat kinase 1
  • Synonyms
    OSMD, RIPK6, Roco1
  • Links
    NCBI Gene ID: 79705
    UniProt: Q38SD2

  • Chr Location
    15q26.3; chr15:100919327-101078257 (+)  GRCh38
Human Diseases
more
  • Diseases
    1 with Lrrk1 mouse models; 1 with human LRRK1 associations

Human Disease Mouse Models
      
IDs
 View 1 model
      
IDs
Click on a disease name to see all genes associated with that disease.

  • Mutations/Alleles
    1 with disease annotations
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    63 phenotypes from 5 alleles in 5 genetic backgrounds
    33 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele exhibit preweaning lethality. Mice homozygous for another knock-out allele exhibit severe osteopetrosis.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    23
  • GO References
    9
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    708
  • Tissues
    88
  • cDNA Data
    65
  • Literature Summary
    4
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 233328 NCBI Gene Model | MGI Sequence Detail 129597 C57BL/6J ±  kb
    transcript NM_146191 RefSeq | MGI Sequence Detail 7467 C57BL/6  
    polypeptide Q3UHC2 UniProt | EBI | MGI Sequence Detail 2014 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 68
      cDNA 65
      Primer pair 2
      Other 1

      Microarray probesets 5
    Other
    Accession IDs
    less
    MGI:2442577, MGI:2442723
    References
    more
    • Summaries
      All 70
      Developmental Gene Expression 4
      Diseases 1
      Gene Ontology 9
      Phenotypes 33
    • Earliest
      J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
    • Latest
      J:365957 Kang J, et al., Cell-autonomous role of leucine-rich repeat kinase in the protection of dopaminergic neuron survival. Elife. 2024 Jun 10;12
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
    Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
    Send questions and comments to User Support.     		last database update
    09/08/2026
    MGI 6.24     		The Jackson Laboratory