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Cab39 Gene Detail
Summary
  • Symbol
    Cab39
  • Name
    calcium binding protein 39
  • Synonyms
    39kDa, MO25alpha
  • Feature Type
    protein coding gene
  • IDs
    MGI:107438
    NCBI Gene: 12283
  • Alliance
    genome feature page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:85721162-85779297 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 43.94 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1041 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_107438
 protein coding gene Chr1:85707796-85779298 (+)
129S1/SvImJ ENSMUSG00200036985
 protein coding gene Chr1:82938101-82996549 (+)
A/J ENSMUSG00195030396
 protein coding gene Chr1:82510327-82568778 (+)
AKR/J ENSMUSG00220037631
 protein coding gene Chr1:82632354-82690492 (+)
BALB/cJ ENSMUSG00180014625
 protein coding gene Chr1:82808366-82866502 (+)
C3H/HeJ ENSMUSG00175001102
 protein coding gene Chr1:82689219-82747661 (+)
C57BL/6NJ ENSMUSG00215011973
 protein coding gene Chr1:82610088-82668224 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0014351
 protein coding gene Chr1:78262204-78322059 (+)
CAST/EiJ ENSTCUG00005007059
 protein coding gene Chr1:82258138-82316597 (+)
CBA/J ENSMUSG00210012325
 protein coding gene Chr1:82532692-82590839 (+)
DBA/2J ENSMUSG00185015694
 protein coding gene Chr1:87005818-87063729 (+)
FVB/NJ ENSMUSG00205020456
 protein coding gene Chr1:81944935-82003390 (+)
JF1/MsJ ENSUMUG00000006659
 protein coding gene Chr1:85781598-85840142 (+)
LP/J ENSMUSG00230014979
 protein coding gene Chr1:86284053-86342500 (+)
NOD/ShiLtJ ENSMUSG00190020873
 protein coding gene Chr1:82587806-82645944 (+)
NZO/HlLtJ ENSMUSG00225004278
 protein coding gene Chr1:90186868-90245318 (+)
PWK/PhJ ENSLUMG00010044526
 protein coding gene Chr1:82157188-82215640 (+)
SPRET/EiJ ENSMSPG00010042957
 protein coding gene Chr1:84167398-84225704 (+)
WSB/EiJ ENSIUOG00005039812
 protein coding gene Chr1:82189549-82247732 (+)



Homology
more
  • Human Ortholog
    CAB39, calcium binding protein 39
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CAB39, calcium binding protein 39
  • Synonyms
    CGI-66, MO25
  • Links
    NCBI Gene ID: 51719
    UniProt: Q9Y376

  • Chr Location
    2q37.1; chr2:230712822-230821076 (+)  GRCh38
Human Diseases
more
  • Diseases
    1 with human CAB39 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    11 phenotypes from 1 allele in 1 genetic background
    14 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    26
  • GO References
    8
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    652
  • Tissues
    19
  • cDNA Data
    272
  • Literature Summary
    4
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000036707 Ensembl Gene Model | MGI Sequence Detail 58136 C57BL/6J ±  kb
    transcript ENSMUST00000097666 Ensembl | MGI Sequence Detail 2369 Not Applicable  
    polypeptide ENSMUSP00000095270 Ensembl | MGI Sequence Detail 341 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 273
      cDNA 272
      Primer pair 1
      Antibodies 1

      Microarray probesets 4
    Other
    Accession IDs
    less
    MGD-MRK-35909, MGI:2138087, MGI:2138141, MGI:2138670
    References
    more
    • Summaries
      All 50
      Developmental Gene Expression 4
      Gene Ontology 8
      Phenotypes 14
    • Earliest
      J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
    • Latest
      J:358384 Ferdaus MZ, et al., Kinase Scaffold Cab39 Is Necessary for Phospho-Activation of the Thiazide-Sensitive NCC. Hypertension. 2024 Apr;81(4):801-810
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    09/01/2026
    MGI 6.24     		The Jackson Laboratory