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Ptma
Gene Detail
 Symbol
Name
ID
Ptma
prothymosin alpha
MGI:97803
Synonyms Thym
Feature Type protein coding gene
Genetic Map
Chromosome 1
43.96 cM, cytoband C5
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr1:86526736-86530698 bp, + strand
From NCBI annotation of GRCm38

  3963 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:130633  Vertebrate Homology Class
1 mouse; 1 rat; 1 rhesus macaque

Protein SuperFamily: prothymosin alpha
Gene Tree: Ptma

Alleles
and
phenotypes
All alleles(48) : Targeted(2) Gene trapped(46)
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process histone exchange
Component nucleus
Function histone binding
External Resources: FuncBase
Expression
Literature Summary: (10 records)
Data Summary: Results (91)    Tissues (73)    Images (13)
Theiler Stages: 9, 11, 13, 15, 17, 19, 20, 22, 23, 24, 28
Assay TypeResults
RNA in situ 84
RT-PCR 1
RNase protection 6
cDNA source data(33)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(35) cDNA(34) Primer pair(1)
Microarray probesets(5)
Other database
links
Ensembl Gene ModelENSMUSG00000026238 (Evidence)
Entrez Gene19231 (Evidence)
DFCITC1573637
DoTSDT.101361400, DT.102542803, DT.102559158, DT.91509017, DT.94217699, DT.94217764, DT.94217776
NIA Mouse Gene IndexU035234, U045023, U093823, U117066
PDB2Z32
Consensus CDS ProjectCCDS35649.1
International Mouse Knockout Project StatusPtma
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 19231 NCBI Gene Model | MGI Sequence Detail 3963 C57BL/6J ±  kb
transcript NM_008972 RefSeq | MGI Sequence Detail 1192 C57BL/6 
polypeptide P26350 UniProt | EBI | MGI Sequence Detail 111 Not Applicable 

For the selected sequences
All sequences(51) RefSeq(2) UniProt(6)
Polymorphisms SNPs within 2kb(13 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR004931 Prothymosin/parathymosin
Protein Ontology PR:000013436 prothymosin alpha
Graphical View of Protein Domain Structure
References (Earliest) J:11117 Schmidt G, et al., Nucleotide sequence of the murine prothymosin alpha cDNA and its deduced primary and secondary protein structure. Biochim Biophys Acta. 1991 Mar 26;1088(3):442-4
(Latest) J:161326 George EM, et al., Prothymosin alpha is a component of a linker histone chaperone. FEBS Lett. 2010 Jul 2;584(13):2833-6
All references(44)
Other
accession IDs
MGD-MRK-13671, MGD-MRK-15105

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory