Casp1
Gene Detail

Symbol Name ID

Casp1 caspase 1 MGI:96544

Synonyms

Caspase-1, ICE, Il1bc, interleukin 1 beta-converting enzyme

Feature Type

protein coding gene

Genetic Map

Chromosome 9

2.46 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)

Sequence Map

Chr9:5298517-5307265 bp, + strand From Ensembl annotation of GRCm38   8749 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:133272  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 rhesus macaque; 1 cattle; 1 chicken

Protein SuperFamily: caspase, interleukin-1 beta convertase type
Gene Tree: Casp1

Human homologs

Human Homolog		CASP1, caspase 1, apoptosis-related cysteine peptidase
NCBI Gene ID		834
neXtProt AC		NX_P29466
Human Synonyms		ICE, IL1BC, P45
Human Chr (Location)		11q23; chr11:104896235-104905884 (-)  GRCh37.p10

Alleles and phenotypes

All alleles(6) : Targeted(6)
 

Homozygous targeted mutants fail to produce mature IL1A and IL1B and are resistant to LPS-induced endotoxin shock and to FAS antibody-induced apoptosis.

 
Alleles Annotated to Human Diseases(1)   

Gene Ontology (GO) classifications

All GO classifications: (54 annotations)

Process	apoptotic process, cell death, ...
Component	AIM2 inflammasome complex, cytoplasm, ...
Function	cysteine-type endopeptidase activity, cysteine-type peptidase activity, ...

External Resources: FuncBase

Expression

Literature Summary: (9 records)
Data Summary: Results (19)    Tissues (14)    Images (1)
Theiler Stages: 1, 4, 18, 20, 21, 23, 25, 26, 28

Assay Type	Results
Northern blot	6
RT-PCR	8
RNase protection	5

cDNA source data(54)
External Resources: GEO   ArrayExpress

Molecular reagents

All nucleic(61) Genomic(2) cDNA(54) Primer pair(4) Other(1)
Microarray probesets(3)

Other database links

Ensembl Gene Model	ENSMUSG00000025888 (Evidence)
Entrez Gene	12362 (Evidence)
UniGene	1051
DFCI	TC1582316
DoTS	DT.110628215, DT.87072414, DT.91378771
NIA Mouse Gene Index	U010012
EC	3.4.22.36
Consensus CDS Project	CCDS22798.1
International Mouse Knockout Project Status	Casp1

Sequences

Length	Strain/Species
genomic	ENSMUSG00000025888	Ensembl Gene Model | MGI Sequence Detail	8749	C57BL/6J
transcript	ENSMUST00000027015	Ensembl | MGI Sequence Detail	1497	Not Applicable
polypeptide	ENSMUSP00000027015	Ensembl | MGI Sequence Detail	402	Not Applicable

All sequences(18) RefSeq(2) UniProt(1)

Polymorphisms

RFLP(1) : SNPs within 2kb(131 from dbSNP Build 137)

Protein-related information

Resource	ID	Description
InterPro	IPR017350	Caspase, interleukin-1 beta convertase
InterPro	IPR001315	Caspase Recruitment
InterPro	IPR011029	Death-like domain
InterPro	IPR011600	Peptidase C14, caspase catalytic
InterPro	IPR002138	Peptidase C14, caspase non-catalytic subunit p10
InterPro	IPR015917	Peptidase C14, caspase precursor p45, core
InterPro	IPR001309	Peptidase C14, ICE, catalytic subunit p20
InterPro	IPR016129	Peptidase C14, ICE, catalytic subunit p20, active site
Protein Ontology	PR:000002309	caspase-1

References

(Earliest) J:11260 Eisenberg SP, et al., Interleukin 1 receptor antagonist is a member of the interleukin 1 gene family: evolution of a cytokine control mechanism. Proc Natl Acad Sci U S A. 1991 Jun 15;88(12):5232-6
(Latest) J:201144 Hagar JA, et al., Cytoplasmic LPS activates caspase-11: implications in TLR4-independent endotoxic shock. Science. 2013 Sep 13;341(6151):1250-3
All references(356)

Other accession IDs

MGD-MRK-11368