About   Help   FAQ
H2-Eb2 Gene Detail
Summary
  • Symbol
    H2-Eb2
  • Name
    histocompatibility 2, class II antigen E beta2
  • Synonyms
    A130038H09Rik, H-2Eb2, Ia5, Ia-5
  • Feature Type
    protein coding gene
  • IDs
    MGI:95902
    NCBI Gene: 381091
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:34325665-34340229 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 17.98 cM
  • Mapping Data
    5 experiments
  • Sequence Tag
Strain
Comparison
more
  • SNPs within 2kb
    4 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_95902
protein coding gene Chr17:34325503-34341410 (+)
129S1/SvImJ MGP_129S1SvImJ_G0023570
protein coding gene Chr17:34334852-34349993 (+)
A/J MGP_AJ_G0023532
protein coding gene Chr17:33166962-33182025 (+)
AKR/J MGP_AKRJ_G0023497
protein coding gene Chr17:33556511-33572874 (+)
BALB/cJ MGP_BALBcJ_G0023536
protein coding gene Chr17:33327607-33342335 (+)
C3H/HeJ MGP_C3HHeJ_G0023296
protein coding gene Chr17:33914116-33929246 (+)
C57BL/6NJ MGP_C57BL6NJ_G0023976
protein coding gene Chr17:35619970-35634307 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0021455
protein coding gene Chr17:31134119-31150812 (+)
CAST/EiJ MGP_CASTEiJ_G0022796
protein coding gene Chr17:34000996-34015378 (+)
CBA/J MGP_CBAJ_G0023274
protein coding gene Chr17:37087133-37103543 (+)
DBA/2J MGP_DBA2J_G0023403
protein coding gene Chr17:32512428-32526758 (+)
FVB/NJ MGP_FVBNJ_G0023369
protein coding gene Chr17:32369391-32384276 (+)
LP/J MGP_LPJ_G0023480
protein coding gene Chr17:34593757-34609197 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0023392
protein coding gene Chr17:36057481-36073404 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0024019
protein coding gene Chr17:33887968-33902340 (+)
PWK/PhJ MGP_PWKPhJ_G0022546
protein coding gene Chr17:31450336-31465511 (+)
SPRET/EiJ MGP_SPRETEiJ_G0022361
protein coding gene Chr17:31850383-31864629 (+)
WSB/EiJ MGP_WSBEiJ_G0022857
protein coding gene Chr17:33927246-33943920 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000067341 Ensembl Gene Model | MGI Sequence Detail 14565 C57BL/6J ±  kb
transcript ENSMUST00000050325 Ensembl | MGI Sequence Detail 2209 Not Applicable  
polypeptide ENSMUSP00000056814 Ensembl | MGI Sequence Detail 287 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR003597 Immunoglobulin C1-set
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR003006 Immunoglobulin/major histocompatibility complex, conserved site
    IPR011162 MHC classes I/II-like antigen recognition protein
    IPR014745 MHC class II, alpha/beta chain, N-terminal
    IPR000353 MHC class II, beta chain, N-terminal
Molecular
Reagents
less
  • All nucleic 37
    Genomic 27
    cDNA 6
    Primer pair 1
    Other 3

    Microarray probesets 2
Other
Accession IDs
less
MGD-MRK-10385, MGD-MRK-10498, MGD-MRK-11048, MGD-MRK-11053, MGI:3588187
References
more
  • Summaries
    All 40
    Phenotypes 3
  • Earliest
    J:5895 Delovitch TL, et al., Immunochemical evidence for three Ia loci in the I-region of the H-2 complex. J Exp Med. 1977 Dec 1;146(6):1549-60
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
05/14/2019
MGI 6.14
The Jackson Laboratory