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Cd69
Gene Detail
Symbol

Name
ID
Cd69
CD69 antigen
MGI:88343
Synonyms
5830438K24Rik, AIM, VEA
Feature Type
protein coding gene
Genetic Map
Chromosome 6
63.21 cM
Detailed Genetic Map ± 1 cM


Mapping data(11)
Sequence Map
Chr6:129267324-129275369 bp, - strand
From NCBI annotation of GRCm38

  8046 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:128584  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 23 chicken

Protein SuperFamily: early activation antigen CD69
Gene Tree: Cd69

Human
homologs
Human Homolog CD69, CD69 molecule
NCBI Gene ID 969
neXtProt AC  NX_Q07108
Human Synonyms  AIM, BL-AC/P26, CLEC2C, EA1, GP32/28, MLR-3
Human Chr (Location)  12p13; chr12:9752486-9760901 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(5) : Targeted(5)
Incidental mutations (data from Mutagenetix , APF )
 
Homozygous mutation of this gene results in slightly increased pre-B and immature B cell numbers in the bone marrow, and increased IgG2a and IgM response to T cell-dependent and T cell-independent antigens. Mutant mice were less prone to collagen induced arthritis.
 
Interactions
Cd69 interacts with 216 markers (Mir1b, Mir7-1, Mir9-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (5 annotations)
Component external side of plasma membrane, integral component of membrane, ...
Function calcium ion binding, carbohydrate binding
External Resources: FuncBase
Expression
Literature Summary: (1 records)
cDNA source data(19)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(31) Genomic(9) cDNA(21) Primer pair(1)
Microarray probesets(3)
Other database
links
Ensembl Gene ModelENSMUSG00000030156 (Evidence)
Entrez Gene12515 (Evidence)
UniGene74745
DFCITC1571856
DoTSDT.91554190, DT.94227550, DT.99864944
NIA Mouse Gene IndexU027912
Consensus CDS ProjectCCDS20582.1
International Mouse Knockout Project StatusCd69
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 12515 NCBI Gene Model | MGI Sequence Detail 8046 C57BL/6J ±  kb
transcript NM_001033122 RefSeq | MGI Sequence Detail 1620 C57BL/6 
polypeptide P37217 UniProt | EBI | MGI Sequence Detail 199 Not Applicable 

For the selected sequences
All sequences(27) RefSeq(4) UniProt(3)
Polymorphisms
All PCR and RFLP(5) : PCR(1) RFLP(4) SNPs within 2kb(57 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001304 C-type lectin
InterPro IPR016187 C-type lectin fold
InterPro IPR016186 C-type lectin-like
Protein Ontology PR:000001343 CD69 molecule
Graphical View of Protein Domain Structure
References
(Earliest) J:9232 Yokoyama WM, et al., Characterization of a cell surface-expressed disulfide-linked dimer involved in murine T cell activation. J Immunol. 1988 Jul 15;141(2):369-76
(Latest) J:203340 Hasegawa A, et al., Crucial role for CD69 in the pathogenesis of dextran sulphate sodium-induced colitis. PLoS One. 2013;8(6):e65494
All references(87)
Other
accession IDs
MGD-MRK-1869, MGI:1889838, MGI:1923299

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory