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Mir130a Gene Detail
Summary
  • Symbol
    Mir130a
  • Name
    microRNA 130a
  • Synonyms
    Mirn130, Mirn130a, mmu-mir-130a
  • Feature Type
    miRNA gene
  • IDs
    MGI:2676816
    NCBI Gene: 387149
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr2:84571459-84571522 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 49.45 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    2 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2676816
 miRNA gene Chr2:84571459-84571522 (-)
129S1/SvImJ MGP_129S1SvImJ_G0008560
 miRNA gene Chr2:85431236-85431299 (-)
A/J MGP_AJ_G0008548
 miRNA gene Chr2:82126799-82126862 (-)
AKR/J MGP_AKRJ_G0008533
 miRNA gene Chr2:84243586-84243649 (-)
BALB/cJ MGP_BALBcJ_G0008536
 miRNA gene Chr2:82260019-82260082 (-)
C3H/HeJ MGP_C3HHeJ_G0008475
 miRNA gene Chr2:84487339-84487402 (-)
C57BL/6NJ MGP_C57BL6NJ_G0008744
 miRNA gene Chr2:88079079-88079142 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0007728
 miRNA gene Chr2:78952538-78952601 (-)
CAST/EiJ MGP_CASTEiJ_G0008333
 miRNA gene Chr2:85015980-85016043 (-)
CBA/J MGP_CBAJ_G0008441
 miRNA gene Chr2:91229898-91229961 (-)
DBA/2J MGP_DBA2J_G0008479
 miRNA gene Chr2:81665282-81665345 (-)
FVB/NJ MGP_FVBNJ_G0008496
 miRNA gene Chr2:80921429-80921492 (-)
LP/J MGP_LPJ_G0008566
 miRNA gene Chr2:85229297-85229360 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0008458
 miRNA gene Chr2:93550510-93550573 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0008732
 miRNA gene Chr2:84481453-84481516 (-)
PWK/PhJ MGP_PWKPhJ_G0008259
 miRNA gene Chr2:81506047-81506110 (-)
SPRET/EiJ MGP_SPRETEiJ_G0008115
 miRNA gene Chr2:84619698-84619761 (-)
WSB/EiJ MGP_WSBEiJ_G0008420
 miRNA gene Chr2:85149019-85149082 (-)



Homology
more
  • Human Ortholog
    MIR130A, microRNA 130a
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MIR130A, microRNA 130a
  • Synonyms
    mir-130a, MIRN130A, miRNA130A
  • Links
    NCBI Gene ID: 406919

  • Chr Location
    chr11:57641198-57641286 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    11 phenotype references
  • All Mutations and Alleles
    11
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Targeted
    5
  • Transgenic
    4
  • Genomic Mutations
    3 involving Mir130a
  • Find Mice (IMSR)
    7 strains or lines available
Mice homozygous for a reporter allele are viable with no observed pathologies.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    10
  • GO References
    8
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    809
  • Tissues
    63
  • Literature Summary
    15
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 387149 NCBI Gene Model | MGI Sequence Detail 64 C57BL/6J ±  kb
transcript NR_029544 RefSeq | MGI Sequence Detail 64 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 13
    Primer pair 6
    Other 7
Other Database
Links
less
miRBase MI0000156
References
more
  • Summaries
    All 50
    Developmental Gene Expression 15
    Gene Ontology 8
    Phenotypes 11
  • Earliest
    J:84907 Lagos-Quintana M, et al., Identification of tissue-specific microRNAs from mouse. Curr Biol. 2002 Apr 30;12(9):735-9
  • Latest
    J:345099 Wang X, et al., Identification and analysis of key circRNAs in the mouse embryonic ovary provides insight into primordial follicle development. BMC Genomics. 2024 Feb 3;25(1):139
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory