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Kcnq1ot1
Gene Detail
 Symbol
Name
ID
Kcnq1ot1
KCNQ1 overlapping transcript 1
MGI:1926855
Synonyms Kvlqt1-as, Lit1
Feature Type unclassified non-coding RNA gene
Genetic Map
Chromosome 7
88.15 cM
Detailed Genetic Map ± 1 cM


Mapping data(8)
Sequence Map
Chr7:143213111-143296547 bp, - strand
From NCBI annotation of GRCm38

  83437 bp   ±  kb flank

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Mouse Genome Browser
Mutations,
alleles, and
phenotypes
All mutations/alleles(15) : Gene trapped(6) Targeted(9)
 
Mice heterozygous for any of several independently generated targeted alleles exhibit abnormal imprinting and may display a growth deficiency.
 
Gene Ontology
(GO)
classifications
All GO classifications: (8 annotations)
Process gene silencing, hypermethylation of CpG island, ...
Function chromatin binding, protein binding
External Resources: FuncBase
Expression
Literature Summary: (22 records)
Data Summary: Results (51)    Tissues (7)    Images (4)
Theiler Stages: 4, 15, 17, 25, 28
Assay TypeResults
RT-PCR 51
cDNA source data(18)
External Resources: Allen Institute   GEO  
Molecular
reagents
All nucleic(28) Genomic(1) cDNA(19) Primer pair(8)
Microarray probesets(5)
Other database
links
Entrez Gene63830 (Evidence)
International Mouse Knockout Project StatusKcnq1ot1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 63830 NCBI Gene Model | MGI Sequence Detail 83437 C57BL/6J ±  kb
transcript NR_001461 RefSeq | MGI Sequence Detail 83437 C57BL/6 

For the selected sequences
All sequences(26) RefSeq(1)
Polymorphisms PCR(1) : SNPs within 2kb(484 from dbSNP Build 137)
References (Earliest) J:10529 Bastian H, et al., A murine even-skipped homologue, Evx 1, is expressed during early embryogenesis and neurogenesis in a biphasic manner [published erratum appears in EMBO J 1991 Dec;10(12):3978]. EMBO J. 1990 Jun;9(6):1839-52
(Latest) J:208270 Zhang H, et al., Long noncoding RNA-mediated intrachromosomal interactions promote imprinting at the Kcnq1 locus. J Cell Biol. 2014 Jan 6;204(1):61-75
All references(50)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory