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Rarres1 Gene Detail
Summary
  • Symbol
    Rarres1
  • Name
    retinoic acid receptor responder (tazarotene induced) 1
  • Synonyms
    5430417P09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924461
    NCBI Gene: 109222
  • Gene Overview
    MyGene.info: RARRES1
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:67478972-67515523 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 30.99 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    365 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924461
protein coding gene Chr3:67478886-67515523 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027282
protein coding gene Chr3:66635565-66673125 (-)
A/J MGP_AJ_G0027244
protein coding gene Chr3:64671237-64710127 (-)
AKR/J MGP_AKRJ_G0027212
protein coding gene Chr3:66067958-66106400 (-)
BALB/cJ MGP_BALBcJ_G0027255
protein coding gene Chr3:64546727-64584555 (-)
C3H/HeJ MGP_C3HHeJ_G0026999
protein coding gene Chr3:66308154-66351369 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027701
protein coding gene Chr3:69125001-69164877 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025054
protein coding gene Chr3:61001744-61036899 (-)
CAST/EiJ MGP_CASTEiJ_G0026446
protein coding gene Chr3:66255799-66295011 (-)
CBA/J MGP_CBAJ_G0026974
protein coding gene Chr3:71283833-71328461 (-)
DBA/2J MGP_DBA2J_G0027110
protein coding gene Chr3:64184974-64226836 (-)
FVB/NJ MGP_FVBNJ_G0027078
protein coding gene Chr3:62817889-62856055 (-)
LP/J MGP_LPJ_G0027218
protein coding gene Chr3:67558107-67604318 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027097
protein coding gene Chr3:75940839-75981923 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027759
protein coding gene Chr3:65944165-65986342 (-)
PWK/PhJ MGP_PWKPhJ_G0026180
protein coding gene Chr3:63922825-63959032 (-)
SPRET/EiJ MGP_SPRETEiJ_G0025996
protein coding gene Chr3:65048797-65084681 (-)
WSB/EiJ MGP_WSBEiJ_G0026524
protein coding gene Chr3:66058514-66102644 (-)



Homology
more
  • Human Ortholog
    RARRES1, retinoic acid receptor responder 1
  • Vertebrate Orthologs
    8
  • Human Ortholog
    RARRES1, retinoic acid receptor responder 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    LXNL, PERG-1, TIG1
  • Links
    NCBI Gene ID: 5918
    neXtProt AC: NX_P49788
    UniProt: P49788

  • Chr Location
    3q25.32; chr3:158697103-158732944 (-)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    2 involving Rarres1
  • Incidental Mutations
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000049404 Ensembl Gene Model | MGI Sequence Detail 36552 C57BL/6J ±  kb
transcript ENSMUST00000054825 Ensembl | MGI Sequence Detail 1325 Not Applicable  
polypeptide ENSMUSP00000056728 Ensembl | MGI Sequence Detail 283 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR009684 Proteinase inhibitor I47, latexin
Molecular
Reagents
less
  • All nucleic 13
    cDNA 13

    Microarray probesets 3
Other
Accession IDs
less
MGI:2139776
References
more
  • Summaries
    All 28
    Developmental Gene Expression 1
    Diseases 1
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:238230 Furlan A, et al., Visceral motor neuron diversity delineates a cellular basis for nipple- and pilo-erection muscle control. Nat Neurosci. 2016 Oct;19(10):1331-40

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory