About   Help   FAQ
Rarres1 Gene Detail
Summary
  • Symbol
    Rarres1
  • Name
    retinoic acid receptor responder (tazarotene induced) 1
  • Synonyms
    5430417P09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924461
    NCBI Gene: 109222
  • Gene Overview
    MyGene.info: RARRES1
Location & Maps
more
  • Sequence Map
    Chr3:67478972-67515523 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      36552 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 30.99 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    RARRES1, retinoic acid receptor responder 1
  • Vertebrate Orthologs
    8
  • Human Ortholog
    RARRES1, retinoic acid receptor responder 1
    Orthology source: HomoloGene
  • Synonyms
    LXNL, PERG-1, TIG1
  • Links
    NCBI Gene ID: 5918
    neXtProt AC: NX_P49788

  • Chr Location
    3q25.32; chr3:158696892-158732691 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    2 involving Rarres1
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000030597 VEGA Gene Model | MGI Sequence Detail 36552 C57BL/6J ±  kb
transcript OTTMUST00000075771 VEGA | MGI Sequence Detail 1325 Not Applicable  
polypeptide OTTMUSP00000039783 VEGA | MGI Sequence Detail 283 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    365 from dbSNP Build 142
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR009684 Proteinase inhibitor I47, latexin
Molecular
Reagents
less
  • All nucleic 12
    cDNA 12

    Microarray probesets 3
Other
Accession IDs
less
MGI:2139776
References
more
  • Summaries
    All 25
    Gene Ontology 1
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
08/17/2016
MGI 6.05
The Jackson Laboratory