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Sdccag8
Gene Detail
Symbol

Name
ID
Sdccag8
serologically defined colon cancer antigen 8
MGI:1924066
Synonyms
2700048G21Rik, 5730470G24Rik, CCCAP
Feature Type
protein coding gene
Genetic Map
Chromosome 1
82.66 cM, cytoband H3
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr1:176814660-177020437 bp, + strand
From VEGA annotation of GRCm38

  205778 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:4839  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: SDCCAG8
Gene Tree: Sdccag8

Human
homologs
SDCCAG8, serologically defined colon cancer antigen 8
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 10806
neXtProt AC: NX_Q86SQ7

Human Synonyms: BBS16, CCCAP, CCCAP SLSN7, hCCCAP, HSPC085, NPHP10, NY-CO-8, SLSN7

Human Chr (Location): 1q43; chr1:243255419-243500091 (+)  GRCh38.p2

Disease Associations: (3) Diseases Associated with Human SDCCAG8

Mutations,
alleles, and
phenotypes
All mutations/alleles(5) : Gene trapped(2) Targeted(2) Transposon induced(1)
Incidental mutations (data from Mutagenetix , APF , CvDC )
 
Mice homozygous for a transposon insertion exhibit cleft palate, neonatal lethality, preaxial polydactyly, and polycystic kindey disease.
 
Interactions
Sdccag8 interacts with 62 markers (Mir22, Mir26a-2, Mir26b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (14 annotations)
Process establishment of cell polarity, microtubule organizing center organization, ...
Component cell-cell junction, cell junction, ...
Function protein binding
External Resources: FuncBase
Expression
Literature Summary: (1 records)
cDNA source data(10)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase sdccag8    NEW 
Molecular
reagents
All nucleic(10) cDNA(10)
Microarray probesets(4)
Other database
links
VEGA Gene Model OTTMUSG00000021519 (Evidence)
Ensembl Gene Model ENSMUSG00000026504 (Evidence)
Entrez Gene 76816 (Evidence)
NIA Mouse Gene Index U042235
Consensus CDS Project CCDS35798.1
International Mouse Phenotyping Consortium Status Sdccag8
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000021519 VEGA Gene Model | MGI Sequence Detail 205778 C57BL/6J ±  kb
transcript OTTMUST00000051035 VEGA | MGI Sequence Detail 2776 Not Applicable 
polypeptide OTTMUSP00000023961 VEGA | MGI Sequence Detail 717 Not Applicable 

For the selected sequences
All sequences(58) RefSeq(14) UniProt(8)
Polymorphisms
SNPs within 2kb(1441 from dbSNP Build 137)    SNPs within 2kb including multiple locations(1445)
Protein-related
information
ResourceIDDescription
Protein Ontology PR:000014559 serologically defined colon cancer antigen 8
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:215665 Insolera R, et al., SDCCAG8 regulates pericentriolar material recruitment and neuronal migration in the developing cortex. Neuron. 2014 Aug 20;83(4):805-22
All references(32)
Other
accession IDs
MGI:1917837

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/25/2015
MGI 6.0
The Jackson Laboratory