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Susd2 Gene Detail
Summary
  • Symbol
    Susd2
  • Name
    sushi domain containing 2
  • Synonyms
    1200011D11Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918983
    NCBI Gene: 71733
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:75636706-75644008 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 38.56 cM, cytoband B5.3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    50 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918983
protein coding gene Chr10:75636619-75644008 (-)
129S1/SvImJ MGP_129S1SvImJ_G0017360
protein coding gene Chr10:75816756-75824146 (-)
A/J MGP_AJ_G0017337
protein coding gene Chr10:73214804-73222193 (-)
AKR/J MGP_AKRJ_G0017298
protein coding gene Chr10:75177381-75184770 (-)
BALB/cJ MGP_BALBcJ_G0017297
protein coding gene Chr10:73410518-73417907 (-)
C3H/HeJ MGP_C3HHeJ_G0017121
protein coding gene Chr10:75215464-75223229 (-)
C57BL/6NJ MGP_C57BL6NJ_G0017755
protein coding gene Chr10:78505040-78512429 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0015445
protein coding gene Chr10:69673183-69680589 (-)
CAST/EiJ MGP_CASTEiJ_G0016692
protein coding gene Chr10:75537276-75544661 (-)
CBA/J MGP_CBAJ_G0017093
protein coding gene Chr10:81572744-81580133 (-)
DBA/2J MGP_DBA2J_G0017198
protein coding gene Chr10:72517695-72525085 (-)
FVB/NJ MGP_FVBNJ_G0017191
protein coding gene Chr10:71658719-71668674 (-)
LP/J MGP_LPJ_G0017271
protein coding gene Chr10:76317594-76324983 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0017219
protein coding gene Chr10:83669500-83676889 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0017794
protein coding gene Chr10:75206084-75213473 (-)
PWK/PhJ MGP_PWKPhJ_G0016475
protein coding gene Chr10:72342937-72350311 (-)
SPRET/EiJ MGP_SPRETEiJ_G0016258
protein coding gene Chr10:74452630-74460010 (-)
WSB/EiJ MGP_WSBEiJ_G0016755
protein coding gene Chr10:75181187-75188603 (-)



Homology
more
  • Human Ortholog
    SUSD2, sushi domain containing 2
  • Vertebrate Orthologs
    8
  • Human Ortholog
    SUSD2, sushi domain containing 2
    Orthology source: HomoloGene, HGNC
  • Synonyms
    BK65A6.2
  • Links
    NCBI Gene ID: 56241
    neXtProt AC: NX_Q9UGT4
    UniProt: Q9UGT4

  • Chr Location
    22q11.23; chr22:24181476-24189106 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000006342 Ensembl Gene Model | MGI Sequence Detail 7303 C57BL/6J ±  kb
transcript ENSMUST00000095541 Ensembl | MGI Sequence Detail 3151 Not Applicable  
polypeptide ENSMUSP00000093197 Ensembl | MGI Sequence Detail 820 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 54
    cDNA 54

    Microarray probesets 3
References
more
  • Summaries
    All 37
    Developmental Gene Expression 4
    Gene Ontology 3
    Phenotypes 8
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory