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1190002N15Rik Gene Detail
Summary
  • Symbol
    1190002N15Rik
  • Name
    RIKEN cDNA 1190002N15 gene
  • Synonyms
    GoPro49
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916111
    NCBI Gene: 68861
Location & Maps
more
  • Sequence Map
    Chr9:94517864-94538081 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      20218 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 49.03 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    C3orf58, chromosome 3 open reading frame 58
  • Vertebrate Orthologs
    11
  • Human Ortholog
    C3orf58, chromosome 3 open reading frame 58
    Orthology source: HGNC, HomoloGene
  • Synonyms
    DIA1, GoPro49, HASF
  • Links
    NCBI Gene ID: 205428
    neXtProt AC: NX_Q8NDZ4

  • Chr Location
    3q24; chr3:143971798-143992368 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Targeted
    4
  • Genomic Mutations
    1 involving 1190002N15Rik
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000046987 VEGA Gene Model | MGI Sequence Detail 20218 C57BL/6J ±  kb
transcript OTTMUST00000121744 VEGA | MGI Sequence Detail 3950 Not Applicable  
polypeptide OTTMUSP00000066992 VEGA | MGI Sequence Detail 430 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    229 from dbSNP Build 142
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR022049 FAM69, protein-kinase domain
    IPR020519 Uncharacterised protein family UPF0672
Molecular
Reagents
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  • All nucleic 61
    cDNA 59
    Primer pair 2

    Microarray probesets 6
References
more
  • Summaries
    All 28
    Developmental Gene Expression 4
    Gene Ontology 5
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:196080 Elsen GE, et al., The protomap is propagated to cortical plate neurons through an Eomes-dependent intermediate map. Proc Natl Acad Sci U S A. 2013 Mar 5;110(10):4081-6

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory