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Abcg2 Gene Detail
Summary
  • Symbol
    Abcg2
  • Name
    ATP binding cassette subfamily G member 2 (Junior blood group)
  • Synonyms
    Bcrp
  • Feature Type
    protein coding gene
  • IDs
    MGI:1347061
    NCBI Gene: 26357
  • Gene Overview
    MyGene.info: ABCG2
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:58584491-58692451 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 27.82 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    552 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1347061
protein coding gene Chr6:58584491-58695676 (.)
129S1/SvImJ MGP_129S1SvImJ_G0030817
protein coding gene Chr6:58196013-58334429 (+)
A/J MGP_AJ_G0030784
protein coding gene Chr6:55666931-55808514 (+)
AKR/J MGP_AKRJ_G0030712
protein coding gene Chr6:57530605-57643778 (+)
BALB/cJ MGP_BALBcJ_G0030794
protein coding gene Chr6:55503935-56094813 (+)
C3H/HeJ MGP_C3HHeJ_G0030510
protein coding gene Chr6:57490690-57619655 (+)
C57BL/6NJ MGP_C57BL6NJ_G0031254
protein coding gene Chr6:59514475-59613300 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0028446
protein coding gene Chr6:52712497-52828954 (+)
CAST/EiJ MGP_CASTEiJ_G0029908
protein coding gene Chr6:57121176-57268641 (+)
CBA/J MGP_CBAJ_G0030483
protein coding gene Chr6:62053744-62124221 (+)
DBA/2J MGP_DBA2J_G0030634
protein coding gene Chr6:55368566-55514498 (+)
FVB/NJ MGP_FVBNJ_G0030583
protein coding gene Chr6:54543175-55059531 (+)
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0031280
protein coding gene Chr6:57366853-57497323 (+)
PWK/PhJ MGP_PWKPhJ_G0029623
protein coding gene Chr6:55103834-55259311 (+)
SPRET/EiJ MGP_SPRETEiJ_G0029448
protein coding gene Chr6:56188128-56724951 (+)
WSB/EiJ MGP_WSBEiJ_G0029989
protein coding gene Chr6:57584332-57698803 (+)



Homology
more
  • Human Ortholog
    ABCG2, ATP binding cassette subfamily G member 2 (Junior blood group)
  • Vertebrate Orthologs
    10
  • Human Ortholog
    ABCG2, ATP binding cassette subfamily G member 2 (Junior blood group)
    Orthology source: HomoloGene, HGNC
  • Synonyms
    ABC15, ABCP, BCRP, BCRP1, BMDP, CD338, CDw338, EST157481, GOUT1, MRX, MXR, MXR1, MXR-1, UAQTL1
  • Links
    NCBI Gene ID: 9429
    neXtProt AC: NX_Q9UNQ0
    UniProt: Q9UNQ0

  • Chr Location
    4q22.1; chr4:88090264-88231417 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 55852
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: ABCG2
  • Gene Tree
Human Diseases
more
  • Diseases
    1 with Abcg2 mouse models

Human Disease Mouse Models
      
IDs
View 1 model
Click on a disease name to see all genes associated with that disease.

  • Mutations/Alleles
    1 with disease annotations
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    31 phenotypes from 5 alleles in 6 genetic backgrounds
    1 phenotype from multigenic genotypes
    56 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Homozygous null mice exhibit extreme sensitivity to the dietary chlorophyll-catabolite pheophorbide a, resulting in severe phototoxic skin lesions upon light exposure. Mutants show a novel form of protoporphyria, associated with a 10-fold increase in erythrocyte levels of protoporphyrin IX.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 26357 NCBI Gene Model | MGI Sequence Detail 107961 C57BL/6J ±  kb
    transcript NM_011920 RefSeq | MGI Sequence Detail 2493 C57BL/6  
    polypeptide Q7TMS5 UniProt | EBI | MGI Sequence Detail 657 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 39
      cDNA 32
      Primer pair 5
      Other 2

      Microarray probesets 4
    Other
    Accession IDs
    less
    MGI:2141405
    References
    more
    • Summaries
      All 104
      Developmental Gene Expression 10
      Diseases 1
      Gene Ontology 7
      Phenotypes 56
    • Earliest
      J:56609 Allikmets R, et al., A human placenta-specific ATP-binding cassette gene (ABCP) on chromosome 4q22 that is involved in multidrug resistance. Cancer Res. 1998 Dec 1;58(23):5337-9
    • Latest
      J:244100 Gaskill CF, et al., Disruption of lineage specification in adult pulmonary mesenchymal progenitor cells promotes microvascular dysfunction. J Clin Invest. 2017 Jun 01;127(6):2262-2276

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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    last database update
    11/13/2018
    MGI 6.13
    The Jackson Laboratory