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Pibf1
Gene Detail
Symbol

Name
ID
Pibf1
progesterone immunomodulatory binding factor 1
MGI:1261910
Synonyms
1700017E21Rik, 4930513H15Rik, 4933438D16Rik, 4933439E17Rik, D14Ertd581e
Feature Type
protein coding gene
Genetic Map
Chromosome 14
49.27 cM, cytoband E2.1
Detailed Genetic Map ± 1 cM


Mapping data(4)
Sequence Map
Chr14:99099433-99254493 bp, + strand
From Ensembl annotation of GRCm38

  155061 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:4628  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Pibf1

Human
homologs
Human Homolog PIBF1, progesterone immunomodulatory binding factor 1
NCBI Gene ID 10464
neXtProt AC  NX_Q8WXW3
Human Synonyms  C13orf24, CEP90, PIBF
Human Chr (Location)  13q22.1; chr13:72782092-73016454 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(17) : Gene trapped(15) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Pibf1 interacts with 114 markers (Mir22, Mir25, Mir26a-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component centrosome
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (2)    Tissues (2)    Images (2)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 2
cDNA source data(28)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(29) cDNA(28) Primer pair(1)
Microarray probesets(5)
Other database
links
Ensembl Gene ModelENSMUSG00000022064 (Evidence)
Entrez Gene52023 (Evidence)
UniGene22835
DFCITC1598692, TC1601995, TC1595824, TC1586418, TC1609163, TC1606699, TC1609524, TC1752667, TC1706482, TC1624976
NIA Mouse Gene IndexU330714, U015914
Consensus CDS ProjectCCDS36997.1
International Mouse Knockout Project StatusPibf1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000022064 Ensembl Gene Model | MGI Sequence Detail 155061 C57BL/6J ±  kb
transcript ENSMUST00000022650 Ensembl | MGI Sequence Detail 3271 Not Applicable 
polypeptide ENSMUSP00000022650 Ensembl | MGI Sequence Detail 756 Not Applicable 

For the selected sequences
All sequences(64) RefSeq(16) UniProt(12)
Polymorphisms
SNPs within 2kb(1514 from dbSNP Build 137)    SNPs within 2kb including multiple locations(1520)
Protein-related
information
ResourceIDDescription
InterPro IPR026205 Progesterone-induced-blocking factor 1
Protein Ontology PR:000012689 progesterone-induced-blocking factor 1
References
(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:204732 Sung YH, et al., Knockout mice created by TALEN-mediated gene targeting. Nat Biotechnol. 2013 Jan;31(1):23-4
All references(37)
Other
accession IDs
MGI:1918542, MGI:1918565, MGI:1922765, MGI:1923071

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory