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Pibf1 Gene Detail
Summary
  • Symbol
    Pibf1
  • Name
    progesterone immunomodulatory binding factor 1
  • Synonyms
    1700017E21Rik, 4930513H15Rik, 4933438D16Rik, 4933439E17Rik, D14Ertd581e
  • Feature Type
    protein coding gene
  • IDs
    MGI:1261910
    NCBI Gene: 52023
  • Gene Overview
    MyGene.info: PIBF1
Location & Maps
more
  • Sequence Map
    Chr14:99099433-99254493 bp, + strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      155061 bp   ±  kb flank

  • Genome Browsers
Homology
more
  • Human Ortholog
    PIBF1, progesterone immunomodulatory binding factor 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    PIBF1, progesterone immunomodulatory binding factor 1
    Orthology source: HGNC, HomoloGene
  • Synonyms
    C13orf24, CEP90, PIBF
  • Links
    NCBI Gene ID: 10464
    neXtProt AC: NX_Q8WXW3

  • Chr Location
    13q22.1; chr13:72782092-73016454 (+)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 4628
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 western clawed frog;1 zebrafish
  • HCOP
    human homology predictions: PIBF1
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    10 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryogenesis
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
tumorigenesis
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    18
  • Chemically induced (other)
    1
  • Gene trapped
    15
  • Targeted
    2
  • Genomic Mutations
    1 involving Pibf1
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000022064 Ensembl Gene Model | MGI Sequence Detail 155061 C57BL/6J ±  kb
transcript ENSMUST00000022650 Ensembl | MGI Sequence Detail 3271 Not Applicable  
polypeptide ENSMUSP00000022650 Ensembl | MGI Sequence Detail 756 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    1509 from dbSNP Build 142
Protein
Information
less
  • UniProt
    6 Sequences
  • InterPro Domains
    IPR026205 Progesterone-induced-blocking factor 1
Molecular
Reagents
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  • All nucleic 29
    cDNA 28
    Primer pair 1

    Microarray probesets 5
Other
Accession IDs
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MGI:1918542, MGI:1918565, MGI:1922765, MGI:1923071
References
more
  • Summaries
    All 33
    Developmental Gene Expression 2
    Gene Ontology 1
    Phenotypes 10
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:204732 Sung YH, et al., Knockout mice created by TALEN-mediated gene targeting. Nat Biotechnol. 2013 Jan;31(1):23-4

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
05/17/2016
MGI 6.03
The Jackson Laboratory