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Champ1 Gene Detail
Summary
  • Symbol
    Champ1
  • Name
    chromosome alignment maintaining phosphoprotein 1
  • Synonyms
    D8Ertd457e, D8Ertd569e, mKIAA1802, Zfp828
  • Feature Type
    protein coding gene
  • IDs
    MGI:1196398
    NCBI Gene: 101994
  • Gene Overview
    MyGene.info: CHAMP1
Location & Maps
more
  • Sequence Map
    Chr8:13869641-13881639 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      11999 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 6.40 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    CHAMP1, chromosome alignment maintaining phosphoprotein 1
  • Vertebrate Orthologs
    8
  • Human Ortholog
    CHAMP1, chromosome alignment maintaining phosphoprotein 1
    Orthology source: HGNC, HomoloGene
  • Synonyms
    C13orf8, CAMP, CHAMP, MRD40, ZNF828
  • Links
    NCBI Gene ID: 283489
    neXtProt AC: NX_Q96JM3

  • Chr Location
    13q34; chr13:114314490-114327328 (+)  GRCh38.p2

Human Diseases
more
  • Diseases
    1 with human CHAMP1 associations

Human Disease Mouse Models
       Mental Retardation, Autosomal Dominant 40; MRD40   OMIM: 616579
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    12
  • Gene trapped
    9
  • Targeted
    3
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000022615 VEGA Gene Model | MGI Sequence Detail 11999 C57BL/6J ±  kb
transcript OTTMUST00000054176 VEGA | MGI Sequence Detail 4013 Not Applicable  
polypeptide OTTMUSP00000025819 VEGA | MGI Sequence Detail 802 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    67 from dbSNP Build 142
Protein
Information
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  • UniProt
    2 Sequences
  • Protein Ontology
    PR:000018179 zinc finger protein 828
  • InterPro Domains
    IPR007087 Zinc finger, C2H2
    IPR015880 Zinc finger, C2H2-like
    IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain
Molecular
Reagents
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  • All nucleic 18
    cDNA 16
    Primer pair 2

    Microarray probesets 6
Other
Accession IDs
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MGI:1261776, MGI:2142441, MGI:2142463
References
more
  • Summaries
    All 36
    Developmental Gene Expression 3
    Gene Ontology 4
    Phenotypes 7
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory