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Tbx5 Gene Detail
Summary
  • Symbol
    Tbx5
  • Name
    T-box 5
  • Feature Type
    protein coding gene
  • IDs
    MGI:102541
    NCBI Gene: 21388
  • Gene Overview
    MyGene.info: TBX5
  • Alliance
Location & Maps
more
  • Sequence Map
    Chr5:119832668-119885219 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      52552 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 60.42 cM
  • Mapping Data
    4 experiments
Homology
more
  • Human Ortholog
    TBX5, T-box 5
  • Vertebrate Orthologs
    10
  • Human Ortholog
    TBX5, T-box 5
    Orthology source: HomoloGene, HGNC
  • Synonyms
    HOS
  • Links
    NCBI Gene ID: 6910
    neXtProt AC: NX_Q99593
    UniProt: Q99593

  • Chr Location
    12q24.21; chr12:114353911-114408708 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 160
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: TBX5
  • Gene Tree
Human Diseases
more
  • Diseases
    1 with Tbx5 mouse models; 1 with human TBX5 associations

Human Disease Mouse Models
      
IDs
View 3 models
Click on a disease name to see all genes associated with that disease.

  • Mutations/Alleles
    2 with disease annotations
  • References
    3 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    63 phenotypes from 3 alleles in 9 genetic backgrounds
    9 phenotypes from multigenic genotypes
    46 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Heterozygous null mice exhibit strain-dependent perinatal lethality, forelimb and variable congenital heart malformations, whereas homozygous null mice are growth arrested and die by E10.5 of severe heart defects. Hypomorphic mutants show milder defects both in the hetero- and homozygous null state.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic OTTMUSG00000056236 VEGA Gene Model | MGI Sequence Detail 52552 C57BL/6J ±  kb
    transcript OTTMUST00000138983 VEGA | MGI Sequence Detail 3942 Not Applicable  
    polypeptide OTTMUSP00000072981 VEGA | MGI Sequence Detail 518 Not Applicable  
    For the selected sequence
    Polymorphisms
    less
    • SNPs within 2kb
      374 from dbSNP Build 142
    • RFLP
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 29
      cDNA 19
      Primer pair 8
      Other 2

      Microarray probesets 5
    Other
    Accession IDs
    less
    MGD-MRK-19390
    References
    more
    • Summaries
      All 306
      Developmental Gene Expression 230
      Diseases 3
      Gene Ontology 29
      Phenotypes 46
    • Earliest
      J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
    • Latest
      J:253972 Hwang SH, et al., The G protein-coupled receptor Gpr161 regulates forelimb formation, limb patterning and skeletal morphogenesis in a primary cilium-dependent manner. Development. 2018 Jan 8;145(1):None

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
    Citing These Resources
    Funding Information
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    last database update
    05/15/2018
    MGI 6.12
    The Jackson Laboratory