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Mapping Data
Experiment
  • Experiment
    CROSS
  • Chromosome
    18
  • Reference
    J:1700 Johnson KR, et al., A multipoint genetic linkage map of mouse chromosome 18. Genomics. 1992 Aug;13(4):1143-9
  • ID
    MGI:40790
Genes
GeneAlleleAssay TypeDescription
Pgk1-rs5 Southern analysis pHPGK-7e
Tpi-rs10 Southern analysis pMurTPI
Egr1 Southern analysis pRSV3.1
Hmgn2-rs9 Southern analysis pM17c
Fgf1 Southern analysis pDH15
Nr3c1 Southern analysis pSV2WREC
Cdx1 Southern analysis pBH8
Csf1r Southern analysis pcfms104
Pdgfrb Southern analysis pRP41
Pde6a Southern analysis p13
Rps14 Southern analysis pCS14-1
Adrb2 Southern analysis pTF3
Mbp Southern analysis pHBP-1
Notes
  • Reference
    Revised gene symbol: Tpi-rs10 (formerly Tpi-10).
  • Experiment
    Offspring types indicate alleles inherited from F1 parent.
CROSS
  • Type
    Backcross, female
  • Female Parent
    <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>/<s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>
  • Strain
    (C57BL/6J x SPRET/Ei)F1
  • Male Parent
    <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>/<s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>
  • Strain
    SPRET/EiJ
  • Mapping Panel
  • Allele 1
    s from SPRET/EiJ
  • Allele 2
    b from C57BL/6J
CROSS Data
MC #mice Pgk1-rs5 Tpi-rs10 Egr1 Hmgn2-rs9 Fgf1 Nr3c1 Cdx1 Csf1r Pdgfrb Pde6a Rps14 Adrb2 Mbp
32 b b b b b b b b b b b b b
30 s s s s s s s s s s s s s
3 b s s s s s s s s s s s s
3 s b b b b b b b b b b b b
8 b b s s s s s s s s s s s
7 s s b b b b b b b b b b b
2 b b b b s s s s s s s s s
1 s s s s b b b b b b b b b
0 b b b b b s s s s s s s s
3 s s s s s b b b b b b b b
7 b b b b b b s s s s s s s
6 s s s s s s b b b b b b b
1 b b b b b b b b b b b s s
1 s s s s s s s s s s s b b
21 b b b b b b b b b b b b s
11 s s s s s s s s s s s s b
Additional Mice Typed Only for Specific Pairs of Loci
Marker 1 Marker 2 # Recombinants # Parentals
Pgk1-rs5 Tpi-rs10 0 4
Tpi-rs10 Hmgn2-rs9 1 7
Egr1 Hmgn2-rs9 0 4
Egr1 Fgf1 0 4
Fgf1 Nr3c1 0 3
Nr3c1 Pde6a 1 2
Pde6a Rps14 0 8
Pdgfrb Rps14 0 8
Cdx1 Pdgfrb 0 4
Cdx1 Csf1r 0 4
Csf1r Adrb2 1 4
Adrb2 Mbp 0 4
Statistics
Marker 1 Marker 2 # Recombinants Total % Recombinants Std Error
Pgk1-rs5 Tpi-rs10 6 140 4.286 1.712
Tpi-rs10 Egr1 15 136 11.029 2.686
Egr1 Hmgn2-rs9 0 140 0.000 0.000
Hmgn2-rs9 Fgf1 3 136 2.206 1.259
Fgf1 Nr3c1 3 139 2.158 1.233
Nr3c1 Cdx1 13 136 9.559 2.521
Cdx1 Csf1r 0 140 0.000 0.000
Csf1r Pdgfrb 0 136 0.000 0.000
Pdgfrb Pde6a 0 136 0.000 0.000
Pde6a Rps14 0 144 0.000 0.000
Rps14 Adrb2 2 136 1.471 1.032
Adrb2 Mbp 32 140 22.857 3.549

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/05/2017
MGI 6.11
The Jackson Laboratory