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Mapping Data
Experiment
  • Experiment
    CROSS
  • Chromosome
    7
  • Reference
    J:10993 Saunders AM, et al., A molecular genetic linkage map of mouse chromosome 7. Genomics. 1990 Nov;8(3):525-35
  • ID
    MGI:40068
Genes
GeneAlleleAssay TypeDescription
Prkcg Southern analysis phPKC-(gamma)6
Apoe Southern analysis p2CL
Atp1a3 Southern analysis pA1
Ckm Southern analysis pJN2CK-M
D7H19S19 Southern analysis p17.4-4(2)
Ercc2 Southern analysis pKER2
Xrcc1 Southern analysis XP1-30
Pou2f2 Southern analysis Puc-3-1
Cyp2a Southern analysis P450-IIA3
Cyp2b Southern analysis pP-450b-5
Rip Southern analysis pf3
Tgfb1 Southern analysis pMUR(beta)2
D7H19F11S1 Southern analysis OL5
Gpi1 Southern analysis HS-10
Mag Southern analysis 5Mag
Nudt19 Southern analysis pMK908
Cebpa Southern analysis CephI
Klk1b9 Southern analysis MB2-12A
Klk1 Southern analysis pMK-1
Lhb Southern analysis (beta)LH
Klk1b3 Southern analysis pSM676
Snrnp70 Southern analysis FL70K
Rras Southern analysis MR-9
Myod1 Southern analysis Myo D1 cDNA
Snrp2a Southern analysis A'910
Hras Southern analysis HB-11
Igf1r Southern analysis pIGF-1-R.8
Fes Southern analysis p80
Tyr Southern analysis MTY811C
Emv23 Southern analysis pEmv-23
D7Was12 Southern analysis clone 12A
Calca Southern analysis rat CT-89
Pth Southern analysis rPTHs-1
Hbb Southern analysis pBR:(beta)
H19 Southern analysis H19RS
Th Southern analysis pHGTH4
Fvis1 Southern analysis p1.8
Notes
  • Reference
    This paper follows the Rip locus using a probe identifying Cyp2b10. Revised gene symbols: Atp1a3, Tgfb1, Snrp70, Snrp2a, Emv23, D7H19S19 and D7H19F11S1 (formerly Atpa-2, Tgfb, Rnu1p70, Rnu2pa, C58v-4, D19S19h and D19F11S1 respectively). Authors use Pkcg for Pkcc.
  • Experiment
    Offspring types indicate alleles inherited from F1 parent.
CROSS
  • Type
    Backcross, female
  • Female Parent
    <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>/<s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>
  • Strain
    (C3H/HeJ-Fasl x M. spretus)F1
  • Male Parent
    <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>/<c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>
  • Strain
    C3H/HeJ-Fasl/J
  • Mapping Panel
    Seldin
  • Allele 1
    c from C3H/HeJ-Fasl/J
  • Allele 2
    s from M. spretus
CROSS Data
MC #mice Prkcg Apoe Atp1a3 Ckm D7H19S19 Ercc2 Xrcc1 Pou2f2 Cyp2a Rip Tgfb1 D7H19F11S1 Gpi1 Mag Nudt19 Cebpa Klk1b9 Klk1 Lhb Klk1b3 Snrnp70 Rras Myod1 Snrp2a Hras Igf1r Fes Tyr Emv23 D7Was12 Calca Pth Hbb H19 Th Fvis1
25 c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c
26 s s s s s s s s s s s s s s s s s s s s s s s s s s s s s s s s s s s s s
1 c s s s s s s s s s s s s s s s s s s s s s s s s s s s s s s s s s s s s
1 s s s s s s s s c c c c c c c c c c c c c c c c c c c c c c c c c c c c c
1 s s s s s s s s s s s s c c c c c c c c c c c c c c c c c c c c c c c c c
1 s s s s s s s s s s s s s c c c c c c c c c c c c c c c c c c c c c c c c
6 c c c c c c c c c c c c c c c c c s s s s s s s s s s s s s s s s s s s s
1 s s s s s s s s s s s s s s s s s c c c c c c c c c c c c c c c c c c c c
1 c c c c c c c c c c c c c c c c c c c c c c c s s s s s s s s s s s s s s
5 c c c c c c c c c c c c c c c c c c c c c c c c s s s s s s s s s s s s s
3 s s s s s s s s s s s s s s s s s s s s s s s s c c c c c c c c c c c c c
1 c c c c c c c c c c c c c c c c c c c c c c c c c s s s s s s s s s s s s
1 s s s s s s s s s s s s s s s s s s s s s s s s s c c c c c c c c c c c c
5 c c c c c c c c c c c c c c c c c c c c c c c c c c c s s s s s s s s s s
2 s s s s s s s s s s s s s s s s s s s s s s s s s s s c c c c c c c c c c
3 c c c c c c c c c c c c c c c c c c c c c c c c c c c c s s s s s s s s s
1 s s s s s s s s s s s s s s s s s s s s s s s s s s s s c c c c c c c c c
1 s s s s s s s s s s s s s s s s s s s s s s s s s s s s s c c c c c c c c
3 c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c s s s s s s
3 s s s s s s s s s s s s s s s s s s s s s s s s s s s s s s s c c c c c c
1 s s s s s s s s s s s s s s s s s s s s s s s s s s s s s s s s s c c c c
7 c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c s s s
1 s c c c c c c c c c c c c c c c c c c c c c c c c c c c c c s s s s s s s
1 c s s s s s s s s s s s s s s s s s s s s s s s s s s s c c c c c c c c c
1 c c c c c c c c c c c c s s s s s s s s s s s s s s s s s s s s s s c c c
1 c c c c c c c c c c c c c s s s s s s s s s s s s s s s s s s s s s c c c
1 c c c c c c c c c c c c c c c s s s s s s s s s s s s s s s s s s s c c c
1 c c c c c c c c c c c c c c c c c s s s s s s s s s s s s s s c c c c c c
1 c c c c c c c c c c c c c c c c c s s s s s s s s s s s s s s s s s c c c
1 s s s s s s s s s s s s s s s s s c c c c c c c c c c c c c c c c c s s s
1 s s s s s s s s s s s s s s s s s c c c c c c c c c c c c c c c c c c s s
1 s s s s s s s s s s s s s s s s s c c c c c c c c c c c c c c c c c c c s
2 c c c c c c c c c c c c c c c c c c c c c c c c s s s s s s s s s s c c c
1 s s s s s s s s s s s s s s s s s s s s s s s s s c c c c c c c c c s s s
1 c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c s s c c c
Statistics
Marker 1 Marker 2 # Recombinants Total % Recombinants Std Error
Prkcg Apoe 3 113 2.655 1.512
Apoe Atp1a3 0 113 0.000 0.000
Atp1a3 Ckm 0 113 0.000 0.000
Ckm D7H19S19 0 113 0.000 0.000
D7H19S19 Ercc2 0 113 0.000 0.000
Ercc2 Xrcc1 0 113 0.000 0.000
Xrcc1 Pou2f2 0 113 0.000 0.000
Pou2f2 Cyp2a 1 113 0.885 0.881
Rip Tgfb1 0 113 0.000 0.000
Tgfb1 D7H19F11S1 2 113 1.770 1.240
D7H19F11S1 Gpi1 2 113 1.770 1.240
Gpi1 Mag 0 113 0.000 0.000
Mag Nudt19 1 113 0.885 0.881
Nudt19 Cebpa 0 113 0.000 0.000
Cebpa Klk1b9 12 113 10.619 2.898
Klk1b9 Klk1 0 113 0.000 0.000
Klk1 Lhb 0 113 0.000 0.000
Lhb Klk1b3 0 113 0.000 0.000
Klk1b3 Snrnp70 0 113 0.000 0.000
Snrnp70 Rras 0 113 0.000 0.000
Rras Myod1 1 113 0.885 0.881
Myod1 Snrp2a 10 113 8.850 2.672
Snrp2a Hras 3 113 2.655 1.512
Hras Igf1r 0 113 0.000 0.000
Igf1r Fes 7 113 6.195 2.268
Fes Tyr 5 113 4.425 1.935
Tyr Emv23 1 113 0.885 0.881
Emv23 D7Was12 1 113 0.885 0.881
D7Was12 Calca 7 113 6.195 2.268
Calca Pth 1 113 0.885 0.881
Pth Hbb 1 113 0.885 0.881
Hbb H19 16 113 14.159 3.280
H19 Th 1 113 0.885 0.881
Th Fvis1 1 113 0.885 0.881

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
05/26/2020
MGI 6.15
The Jackson Laboratory