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Comparative GO Graph (mouse, human, rat, zebrafish)
Source
Alliance of Genome Resources

Compare experimental GO annotations for Human-Mouse-Rat-Zebrafish orthologs to Mouse Hoxb1

Graphs for Molecular Function, Cellular Component, Biological Process generated Mon Apr 26 17:39:58 2021.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

Molecular Function


Cellular Component


Biological Process



Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Hoxb1
Category ID Classification term Gene Evidence Inferred from Organism Reference
Molecular FunctionGO:0003677DNA bindingHOXB1IDAHumanPMID:10052460
Molecular FunctionGO:0003677DNA bindingHoxb1IDAMouseMGI:MGI:67108|PMID:7911971
Molecular FunctionGO:0001228DNA-binding transcription activator activity, RNA polymerase II-specificHOXB1IDAHumanPMID:9556594
Molecular FunctionGO:0019904protein domain specific bindingHOXB1IPIUniProtKB:P40424HumanPMID:10052460
Molecular FunctionGO:0000978RNA polymerase II cis-regulatory region sequence-specific DNA bindingHOXB1IDAHumanPMID:9556594
Molecular FunctionGO:0000978RNA polymerase II cis-regulatory region sequence-specific DNA bindingHoxb1IDAMouseMGI:MGI:894947|PMID:9242495
Molecular FunctionGO:0000977RNA polymerase II transcription regulatory region sequence-specific DNA bindingHOXB1IDAHumanPMID:9556594
Molecular FunctionGO:0043565sequence-specific DNA bindingHoxb1IGIMGI:MGI:97495MouseMGI:MGI:3817812|PMID:18787068
Molecular FunctionGO:0043565sequence-specific DNA bindinghoxb1aIDAZfishPMID:18787068|ZFIN:ZDB-PUB-101027-50
Molecular FunctionGO:0043565sequence-specific DNA bindinghoxb1aIDAZfishPMID:24480644|ZFIN:ZDB-PUB-140404-8
Molecular FunctionGO:0043565sequence-specific DNA bindinghoxb1bIDAZfishPMID:24480644|ZFIN:ZDB-PUB-140404-8
Molecular FunctionGO:1990837sequence-specific double-stranded DNA bindingHOXB1IDAHumanPMID:28473536
Biological ProcessGO:0048646anatomical structure formation involved in morphogenesisHoxb1IGIMGI:MGI:96170MouseMGI:MGI:1346308|PMID:10529420
Biological ProcessGO:0009653anatomical structure morphogenesisHoxb1IGIMGI:MGI:96170MouseMGI:MGI:1346308|PMID:10529420
Biological ProcessGO:0009952anterior/posterior pattern specificationHoxb1IGIMGI:MGI:96183|MGI:MGI:96184|MGI:MGI:96185|MGI:MGI:96186|MGI:MGI:96187|MGI:MGI:96188|MGI:MGI:96189|MGI:MGI:96190MouseMGI:MGI:1859107|PMID:10885747
Biological ProcessGO:0009952anterior/posterior pattern specificationHoxb1IGIMGI:MGI:96170MouseMGI:MGI:1346308|PMID:10529420
Biological ProcessGO:0021535cell migration in hindbrainhoxb1aIMPZFIN:ZDB-GENO-140917-13ZfishPMID:24902847|ZFIN:ZDB-PUB-140607-12
Biological ProcessGO:0048704embryonic skeletal system morphogenesisHoxb1IGIMGI:MGI:96183|MGI:MGI:96184|MGI:MGI:96185|MGI:MGI:96186|MGI:MGI:96187|MGI:MGI:96188|MGI:MGI:96189|MGI:MGI:96190MouseMGI:MGI:1859107|PMID:10885747
Biological ProcessGO:0000132establishment of mitotic spindle orientationhoxb1bIMPZFIN:ZDB-GENO-140513-5ZfishPMID:24449840|ZFIN:ZDB-PUB-140321-15
Biological ProcessGO:0021561facial nerve developmenthoxb1aIMPZFIN:ZDB-MRPHLNO-050825-1ZfishPMID:11973267|ZFIN:ZDB-PUB-020514-10
Biological ProcessGO:0021561facial nerve developmenthoxb1aIMPZFIN:ZDB-GENO-181220-4ZfishPMID:29496480|ZFIN:ZDB-PUB-180303-2
Biological ProcessGO:0021612facial nerve structural organizationHoxb1IMPMGI:MGI:1857824MouseMGI:MGI:83677|PMID:8898234
Biological ProcessGO:0021754facial nucleus developmentHoxb1IMPMGI:MGI:1857824MouseMGI:MGI:83677|PMID:8898234
Biological ProcessGO:0021754facial nucleus developmenthoxb1aIMPZFIN:ZDB-GENO-140917-13ZfishPMID:24902847|ZFIN:ZDB-PUB-140607-12
Biological ProcessGO:0021592fourth ventricle developmenthoxb1bIMPZFIN:ZDB-GENO-140513-5ZfishPMID:24449840|ZFIN:ZDB-PUB-140321-15
Biological ProcessGO:0030902hindbrain developmenthoxb1bIMPZFIN:ZDB-MRPHLNO-050825-2ZfishPMID:11973267|ZFIN:ZDB-PUB-020514-10
Biological ProcessGO:0030902hindbrain developmenthoxb1bIMPZFIN:ZDB-GENO-140917-10ZfishPMID:24902847|ZFIN:ZDB-PUB-140607-12
Biological ProcessGO:0030902hindbrain developmenthoxb1bIMPZfishPMID:15044546|ZFIN:ZDB-PUB-040329-10
Biological ProcessGO:0030902hindbrain developmenthoxb1bIMPZFIN:ZDB-GENO-181220-5ZfishPMID:29496480|ZFIN:ZDB-PUB-180303-2
Biological ProcessGO:0021578hindbrain maturationhoxb1aIMPZFIN:ZDB-GENO-140917-13ZfishPMID:24902847|ZFIN:ZDB-PUB-140607-12
Biological ProcessGO:0021575hindbrain morphogenesishoxb1bIMPZFIN:ZDB-GENO-130621-1ZfishPMID:23299976|ZFIN:ZDB-PUB-130118-4
Biological ProcessGO:0014025neural keel formationhoxb1bIMPZFIN:ZDB-GENO-140513-5ZfishPMID:24449840|ZFIN:ZDB-PUB-140321-15
Biological ProcessGO:0034728nucleosome organizationhoxb1bIDAZfishPMID:24902847|ZFIN:ZDB-PUB-140607-12
Biological ProcessGO:0071599otic vesicle developmenthoxb1bIMPZFIN:ZDB-GENO-130621-1ZfishPMID:23299976|ZFIN:ZDB-PUB-130118-4
Biological ProcessGO:0035066positive regulation of histone acetylationhoxb1bIGIZFIN:ZDB-GENE-000201-18,ZFIN:ZDB-GENE-020122-5ZfishPMID:24480644|ZFIN:ZDB-PUB-140404-8
Biological ProcessGO:0045944positive regulation of transcription by RNA polymerase IIHOXB1IDAHumanPMID:9556594
Biological ProcessGO:0045944positive regulation of transcription by RNA polymerase IIHoxb1IDAMouseMGI:MGI:3817812|PMID:18787068
Biological ProcessGO:0031060regulation of histone methylationhoxb1bIGIZFIN:ZDB-GENE-000201-18,ZFIN:ZDB-GENE-020122-5ZfishPMID:24480644|ZFIN:ZDB-PUB-140404-8
Biological ProcessGO:0021570rhombomere 4 developmentHoxb1IGIMGI:MGI:96170MouseMGI:MGI:1346308|PMID:10529420
Biological ProcessGO:0021570rhombomere 4 developmenthoxb1aIMPZFIN:ZDB-MRPHLNO-050825-1ZfishPMID:17651720|ZFIN:ZDB-PUB-070806-13
Biological ProcessGO:0021570rhombomere 4 developmenthoxb1aIMPZFIN:ZDB-GENO-181220-4ZfishPMID:29496480|ZFIN:ZDB-PUB-180303-2
Biological ProcessGO:0021570rhombomere 4 developmenthoxb1bIMPZFIN:ZDB-GENO-140917-10ZfishPMID:29945667|ZFIN:ZDB-PUB-180628-1
Biological ProcessGO:0021570rhombomere 4 developmenthoxb1aIDAZfishPMID:17651720|ZFIN:ZDB-PUB-070806-13
Biological ProcessGO:0021663rhombomere 4 formationhoxb1bIMPZFIN:ZDB-GENO-140917-10ZfishPMID:24902847|ZFIN:ZDB-PUB-140607-12
Biological ProcessGO:0021661rhombomere 4 morphogenesishoxb1aIMPZFIN:ZDB-GENO-140917-13ZfishPMID:24902847|ZFIN:ZDB-PUB-140607-12
Biological ProcessGO:0021571rhombomere 5 developmentHoxb1IGIMGI:MGI:96170MouseMGI:MGI:1346308|PMID:10529420
Biological ProcessGO:0021546rhombomere developmentHoxb1IDAMouseMGI:MGI:4949985|PMID:21320481
Biological ProcessGO:0021593rhombomere morphogenesishoxb1bIMPZFIN:ZDB-GENO-140917-10ZfishPMID:24902847|ZFIN:ZDB-PUB-140607-12

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment
  IDA Inferred from direct assay
  IEP Inferred from expression pattern
  IGI Inferred from genetic interaction
  IMP Inferred from mutant phenotype
  IPI Inferred from physical interaction
  HTP Inferred from High Throughput Experiment
  HDA Inferred from High Throughput Direct Assay
  HMP Inferred from High Throughput Mutant Phenotype
  HGI Inferred from High Throughput Genetic Interaction
  HEP Inferred from High Throughput Expression Pattern

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
01/18/2022
MGI 6.17
The Jackson Laboratory