About   Help   FAQ
Gm5499 Pseudogene Detail
Summary
  • Symbol
    Gm5499
  • Name
    predicted pseudogene 5499
  • Feature Type
    pseudogene
  • IDs
    MGI:3643804
    NCBI Gene: 433144
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:87385699-87386583 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 56.90 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    10 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3643804
 pseudogene Chr17:87385688-87387658 (+)
129S1/SvImJ MGP_129S1SvImJ_G0011407
 pseudogene Chr17:90439900-90440639 (+)
A/J MGP_AJ_G0011395
 pseudogene Chr17:87531853-87533604 (+)
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0011262
 pseudogene Chr17:89869699-89870776 (+)
C57BL/6NJ MGP_C57BL6NJ_G0011668
 pseudogene Chr17:93559535-93562829 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0010516
 pseudogene Chr2:78883027-78888732 (-)
CAST/EiJ MGP_CASTEiJ_G0011384
 pseudogene Chr2:84936186-84941819 (-)
CBA/J no annotation
DBA/2J MGP_DBA2J_G0011290
 pseudogene Chr17:85968704-85970443 (+)
FVB/NJ MGP_FVBNJ_G0011297
 pseudogene Chr17:85473849-85480386 (+)
LP/J MGP_LPJ_G0011367
 pseudogene Chr17:91223346-91224230 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0011653
 pseudogene Chr17:89512491-89514673 (+)
PWK/PhJ MGP_PWKPhJ_G0011236
 pseudogene Chr2:81433172-81439144 (-)
SPRET/EiJ MGP_SPRETEiJ_G0011061
 pseudogene Chr2:84548748-84554459 (-)
WSB/EiJ MGP_WSBEiJ_G0011412
 pseudogene Chr2:85076928-85082507 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    18
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000071035 Ensembl Gene Model | MGI Sequence Detail 885 C57BL/6J ±  kb
transcript ENSMUST00000090731 Ensembl | MGI Sequence Detail 885 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 4
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory