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Mammalian Phenotype Ontology Annotations
Query Results - Summary
Symbol
Name
ID
Pax6
paired box 6
MGI:97490
46 phenotypes from multigenic genotypes
Export: Excel File
Allelic Composition
Genetic Background
Annotated Term Reference
Emx2tm1Sia/Emx2tm1Sia
Pax6Sey/Pax6Sey
involves: C57BL/6 * CBA
abnormal Ammon gyrus morphology J:98539
abnormal brain commissure morphology J:98539
abnormal brain morphology J:98539
abnormal cerebral cortex morphology J:98539
abnormal embryonic/fetal subventricular zone morphology J:98539
abnormal pretectal region morphology J:98539
abnormal tectum morphology J:98539
abnormal telencephalon morphology J:98539
abnormal thalamus morphology J:98539
absent choroid plexus J:98539
absent diencephalon J:98539
absent hippocampus J:98539
Gli2tm1Alj/Gli2tm1Alj
Pax6Sey/Pax6Sey
involves: 129S1/Sv * 129X1/SvJ
abnormal neuron differentiation J:112802
Mitfmi-vga9/Mitf+
Pax6Sey-Neu/Pax6+
involves: C57BL/6 * CBA
abnormal retina pigment epithelium morphology J:188155
Mitfmi-vga9/Mitfmi-vga9
Pax6Sey-Neu/Pax6+
involves: C57BL/6 * CBA
abnormal retina pigment epithelium morphology J:188155
Mitfmi-vga9/Mitfmi-vga9
Pax6Sey-Neu/Pax6Sey-Neu
involves: C57BL/6 * CBA
abnormal retina pigment epithelium morphology J:188155
Mitftm3.1Arnh/Mitftm3.1Arnh
Pax6Sey-Neu/Pax6+
involves: 129S6/SvEvTac * C57BL/6N
abnormal retina pigment epithelium morphology J:188155
Pax6Sey-H/Pax6+
involves: 101/H * C3H/HeH
belly spot J:8534
coloboma J:8534
decreased body size J:8534
lowered ear position J:8534
microphthalmia J:8534
reduced female fertility J:8534
small ears J:8534
Pax6Sey-H/Pax6Sey-H
involves: 101/H * C3H/HeH
embryonic lethality, complete penetrance J:8534
Pax6Sey-Neu/Pax6+
Sox2tm1.1Vep/Sox2+
involves: 102 * C3H * C3H/HeN
abnormal lens morphology J:119175
Pax6Sey/Pax6Sey-H
involves: 101/H * C3H/HeH * C57BL/10
abnormal face development J:8534
abnormal maxillary shelf morphology J:8534
absent snout J:8534
anophthalmia J:8534
decreased embryo size J:8534
Pax6Sey/Pax6Sey-Neu
Tg(Hbb-b1)83Clo/0
involves: 102 * C3H * C57BL * CBA/Ca * CD-1 * SJL
abnormal craniofacial bone morphology J:43913
abnormal nasal capsule morphology J:43913
supernumerary incisors J:43913
Pax6Sey/Pax6Sey
Tg(Hbb-b1)83Clo/0
involves: C57BL * CBA/Ca * CD-1 * SJL
abnormal craniofacial bone morphology J:43913
abnormal nasal capsule morphology J:43913
supernumerary incisors J:43913
Pax6Sey/Pax6Sey
Tg(PAX6)77Ndha/?
involves: C57BL/6 * CBA
normal nervous system phenotype J:34194
normal taste/olfaction phenotype J:34194
normal vision/eye phenotype J:34194
Pax6tm2(Pax6_i5a,Pax2)Xzh/Pax6+
involves: 129S6/SvEvTac
normal vision/eye phenotype J:198381
Pax6tm2(Pax6_i5a,Pax2)Xzh/Pax6tm2(Pax6_i5a,Pax2)Xzh
involves: 129S6/SvEvTac
abnormal eye development J:198381
abnormal neuronal precursor proliferation J:198381
abnormal retina development J:198381
abnormal telencephalon development J:198381
thin cortical plate J:198381
Pax6tm2.1(Pax6_i5a,Pax2)Xzh/Pax6+
involves: 129S6/SvEvTac * C57BL/6 * FVB/N
corneal-lenticular stalk J:198381
Pax6tm2.1(Pax6_i5a,Pax2)Xzh/Pax6tm2.1(Pax6_i5a,Pax2)Xzh
involves: 129S6/SvEvTac * C57BL/6 * FVB/N
abnormal cortical plate morphology J:198381
abnormal eye development J:198381
abnormal neuronal precursor proliferation J:198381
abnormal retina development J:198381
abnormal telencephalon development J:198381
Pax6tm2Pgr/Pax6tm2Pgr
Smarcc2tm1.1Stoy/Smarcc2+
Emx1tm1(cre)Krj/Emx1+
involves: 129S1/Sv * 129S2/SvPas * C57BL/6
abnormal neuron number J:197141
normal nervous system phenotype J:197141
Pax6tm2Pgr/Pax6tm2Pgr
Smarcc2tm1.1Stoy/Smarcc2tm1.1Stoy
Emx1tm1(cre)Krj/Emx1+
involves: 129S1/Sv * 129S2/SvPas * C57BL/6
abnormal neocortex morphology J:197141
abnormal neuron number J:197141
abnormal neuronal precursor cell number J:197141
Pax6tm2Pgr/Pax6tm2Pgr
Sox2tm1.1Lan/Sox2tm1.1Lan
Tg(Cryaa-cre)10Mlr/0
involves: 129S1/Sv * 129X1/SvJ * C57BL/6 * FVB/N * SJL
abnormal lens epithelium morphology J:152850
increased lens epithelium apoptosis J:152850
microphthalmia J:152850

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory