Mir7653 Gene Detail

Summary

• Symbol
  Mir7653
• Name
  microRNA 7653
• Synonyms
  mmu-mir-7653

• Feature Type
  miRNA gene
• IDs
  MGI:5531282
  NCBI Gene: 102465761
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr11:78069653-78069713 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  64 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5531282	miRNA gene	Chr11:78069653-78069713 (+)
129S1/SvImJ	ENSMUSG00200051309	miRNA gene	Chr11:75186539-75186599 (+)
A/J	ENSMUSG00195046641	miRNA gene	Chr11:75065312-75065372 (+)
AKR/J	ENSMUSG00220048719	miRNA gene	Chr11:75289227-75289287 (+)
BALB/cJ	ENSMUSG00180043551	miRNA gene	Chr11:75254090-75254150 (+)
C3H/HeJ	ENSMUSG00175041148	miRNA gene	Chr11:75223315-75223375 (+)
C57BL/6NJ	ENSMUSG00215043225	miRNA gene	Chr11:74847327-74847387 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007143	miRNA gene	Chr11:73111607-73111663 (+)
CAST/EiJ	ENSTCUG00005045560	miRNA gene	Chr11:74745098-74745158 (+)
CBA/J	ENSMUSG00210047560	miRNA gene	Chr11:75041748-75041808 (+)
DBA/2J	ENSMUSG00185041744	miRNA gene	Chr11:75311779-75311839 (+)
FVB/NJ	ENSMUSG00205047272	miRNA gene	Chr11:75141353-75141413 (+)
JF1/MsJ	ENSUMUG00000052772	miRNA gene	Chr11:75689452-75689512 (+)
LP/J	ENSMUSG00230049785	miRNA gene	Chr11:76342259-76342319 (+)
NOD/ShiLtJ	ENSMUSG00190048607	miRNA gene	Chr11:75358846-75358906 (+)
NZO/HlLtJ	ENSMUSG00225039532	miRNA gene	Chr11:78509734-78509794 (+)
PWK/PhJ	ENSLUMG00010026437	miRNA gene	Chr11:75214544-75214604 (+)
SPRET/EiJ	ENSMSPG00010045299	miRNA gene	Chr11:75626049-75626109 (+)
WSB/EiJ	ENSIUOG00005037076	miRNA gene	Chr11:75196833-75196893 (+)

Homology

• Gene Tree
  Mir7653
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  8 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Targeted
  1
• Genomic Mutations
  2 involving Mir7653
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000099101 (Evidence)
• NCBI Gene
  102465761

Representative Sequences			Length	Strain/Species
genomic	102465761	NCBI Gene Model | MGI Sequence Detail	61	C57BL/6J
transcript	NR_106113	RefSeq | MGI Sequence Detail	61	ZRU/MplStud

Other Database
Links

miRBase

MI0024993

References

• Summaries
  All 13

  Phenotypes 8
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52

TSS for Mir7653:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr103233	Chr11:78069502-78069521 (+)	-141 bp
Tssr103234	Chr11:78069529-78069598 (+)	-89 bp