Gm24949 Gene Detail

Summary

• Symbol
  Gm24949
• Name
  predicted gene, 24949

• Feature Type
  snoRNA gene
• IDs
  MGI:5454726
  NCBI Gene: 115487926
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:95923504-95923718 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  122 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5454726	snoRNA gene	Chr11:95923504-95923718 (+)
129S1/SvImJ	ENSMUSG00200053658	snoRNA gene	Chr11:93167838-93168052 (+)
A/J	ENSMUSG00195052439	snoRNA gene	Chr11:92889678-92889892 (+)
AKR/J	ENSMUSG00220051748	snoRNA gene	Chr11:93148738-93148952 (+)
BALB/cJ	ENSMUSG00180052258	snoRNA gene	Chr11:93151154-93151368 (+)
C3H/HeJ	ENSMUSG00175052539	snoRNA gene	Chr11:93148953-93149167 (+)
C57BL/6NJ	ENSMUSG00215054167	snoRNA gene	Chr11:92740977-92741191 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005051753	snoRNA gene	Chr11:92593759-92593973 (+)
CBA/J	ENSMUSG00210053800	snoRNA gene	Chr11:92852239-92852453 (+)
DBA/2J	ENSMUSG00185051897	snoRNA gene	Chr11:93197779-93197993 (+)
FVB/NJ	ENSMUSG00205049364	snoRNA gene	Chr11:93054900-93055114 (+)
JF1/MsJ	ENSUMUG00000055668	snoRNA gene	Chr11:93504755-93504969 (+)
LP/J	ENSMUSG00230051369	snoRNA gene	Chr11:94250962-94251176 (+)
NOD/ShiLtJ	ENSMUSG00190052255	snoRNA gene	Chr11:93244842-93245056 (+)
NZO/HlLtJ	ENSMUSG00225053196	snoRNA gene	Chr11:96306151-96306365 (+)
PWK/PhJ	ENSLUMG00010051541	snoRNA gene	Chr11:93049905-93050119 (+)
SPRET/EiJ	ENSMSPG00010050717	snoRNA gene	Chr11:93539720-93539934 (+)
WSB/EiJ	ENSIUOG00005051813	snoRNA gene	Chr11:92993986-92994200 (+)

Homology

• Gene Tree
  Gm24949
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  2
• Targeted
  2
• Genomic Mutations
  2 involving Gm24949
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

• All GO Annotations
  2
• GO References
  1

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000119079 (Evidence)
• NCBI Gene
  115487926

Representative Sequences			Length	Strain/Species
genomic	115487926	NCBI Gene Model | MGI Sequence Detail	215	C57BL/6J
transcript	XR_004937383	RefSeq | MGI Sequence Detail	215	C57BL/6J

References

• Summaries
  All 10

  Gene Ontology 1

  Phenotypes 6
• Earliest
  J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
• Latest
  J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52