Gm23971 Gene Detail

Summary

• Symbol
  Gm23971
• Name
  predicted gene, 23971

• Feature Type
  snRNA gene
• IDs
  MGI:5453748
  NCBI Gene: 115487918
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:101536566-101536756 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  130 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453748	snRNA gene	Chr11:101536566-101536756 (-)
129S1/SvImJ	ENSMUSG00200053209	snRNA gene	Chr11:98821037-98821227 (-)
A/J	ENSMUSG00195052910	snRNA gene	Chr11:98517689-98517879 (-)
AKR/J	ENSMUSG00220052859	snRNA gene	Chr11:98736974-98737164 (-)
BALB/cJ	ENSMUSG00180052182	snRNA gene	Chr11:98869197-98869387 (-)
C3H/HeJ	ENSMUSG00175052474	snRNA gene	Chr11:98794570-98794760 (-)
C57BL/6NJ	ENSMUSG00215054175	snRNA gene	Chr11:98356611-98356801 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005050725	snRNA gene	Chr11:98282636-98282826 (-)
CBA/J	ENSMUSG00210053760	snRNA gene	Chr11:98502442-98502632 (-)
DBA/2J	ENSMUSG00185053647	snRNA gene	Chr11:98844425-98844615 (-)
FVB/NJ	ENSMUSG00205049930	snRNA gene	Chr11:98687304-98687494 (-)
JF1/MsJ	ENSUMUG00000056061	snRNA gene	Chr11:99103690-99103880 (-)
LP/J	ENSMUSG00230051119	snRNA gene	Chr11:99897059-99897249 (-)
NOD/ShiLtJ	ENSMUSG00190053000	snRNA gene	Chr11:98882984-98883174 (-)
NZO/HlLtJ	ENSMUSG00225053611	snRNA gene	Chr11:101919267-101919457 (-)
PWK/PhJ	ENSLUMG00010052786	snRNA gene	Chr11:98639793-98639983 (-)
SPRET/EiJ	ENSMSPG00010051300	snRNA gene	Chr11:99135709-99135899 (-)
WSB/EiJ	ENSIUOG00005051360	snRNA gene	Chr11:98630520-98630710 (-)

Homology

• Gene Tree
  Gm23971
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm23971
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000119892 (Evidence)
• NCBI Gene
  115487918

Representative Sequences			Length	Strain/Species
genomic	115487918	NCBI Gene Model | MGI Sequence Detail	191	C57BL/6J
transcript	XR_004937380	RefSeq | MGI Sequence Detail	191	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
• Latest
  J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52