Gm23849 Gene Detail

Summary

• Symbol
  Gm23849
• Name
  predicted gene, 23849

• Feature Type
  snRNA gene
• IDs
  MGI:5453626
  NCBI Gene: 115487916
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:101518192-101518382 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  148 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453626	snRNA gene	Chr11:101518192-101518382 (+)
129S1/SvImJ	ENSMUSG00200053201	snRNA gene	Chr11:98802619-98802809 (+)
A/J	ENSMUSG00195052901	snRNA gene	Chr11:98499267-98499457 (+)
AKR/J	ENSMUSG00220052848	snRNA gene	Chr11:98718607-98718797 (+)
BALB/cJ	ENSMUSG00180052170	snRNA gene	Chr11:98850827-98851017 (+)
C3H/HeJ	ENSMUSG00175052468	snRNA gene	Chr11:98776159-98776349 (+)
C57BL/6NJ	ENSMUSG00215054173	snRNA gene	Chr11:98338234-98338424 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005050714	snRNA gene	Chr11:98264411-98264601 (+)
CBA/J	ENSMUSG00210053757	snRNA gene	Chr11:98484070-98484260 (+)
DBA/2J	ENSMUSG00185053630	snRNA gene	Chr11:98826012-98826202 (+)
FVB/NJ	ENSMUSG00205049917	snRNA gene	Chr11:98668930-98669120 (+)
JF1/MsJ	ENSUMUG00000056070	snRNA gene	Chr11:99085561-99085751 (+)
LP/J	ENSMUSG00230051097	snRNA gene	Chr11:99878648-99878838 (+)
NOD/ShiLtJ	ENSMUSG00190052995	snRNA gene	Chr11:98864572-98864762 (+)
NZO/HlLtJ	ENSMUSG00225053500	snRNA gene	Chr11:101900929-101901119 (+)
PWK/PhJ	ENSLUMG00010052792	snRNA gene	Chr11:98621636-98621826 (+)
SPRET/EiJ	ENSMSPG00010051296	snRNA gene	Chr11:99117515-99117705 (+)
WSB/EiJ	ENSIUOG00005051353	snRNA gene	Chr11:98612148-98612338 (+)

Homology

• Gene Tree
  Gm23849
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm23849
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000119776 (Evidence)
• NCBI Gene
  115487916

Representative Sequences			Length	Strain/Species
genomic	115487916	NCBI Gene Model | MGI Sequence Detail	191	C57BL/6J
transcript	XR_004937378	RefSeq | MGI Sequence Detail	191	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
• Latest
  J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52