Gm23506 Gene Detail

Summary

• Symbol
  Gm23506
• Name
  predicted gene, 23506

• Feature Type
  snRNA gene
• IDs
  MGI:5453283
  NCBI Gene: 115487937
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:85053903-85054009 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  82 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453283	snRNA gene	Chr11:85053903-85054009 (+)
129S1/SvImJ	ENSMUSG00200020436	snRNA gene	Chr11:82198771-82198877 (+)
A/J	ENSMUSG00195009399	snRNA gene	Chr11:82053340-82053446 (+)
AKR/J	ENSMUSG00220012400	snRNA gene	Chr11:82260843-82260949 (+)
BALB/cJ	ENSMUSG00180011492	snRNA gene	Chr11:82244582-82244688 (+)
C3H/HeJ	ENSMUSG00175032250	snRNA gene	Chr11:82200160-82200266 (+)
C57BL/6NJ	ENSMUSG00215030513	snRNA gene	Chr11:81828244-81828350 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005046550	snRNA gene	Chr11:81761814-81761920 (+)
CBA/J	ENSMUSG00210039879	snRNA gene	Chr11:82017788-82017894 (+)
DBA/2J	ENSMUSG00185020281	snRNA gene	Chr11:82342342-82342448 (+)
FVB/NJ	ENSMUSG00205021423	snRNA gene	Chr11:82132283-82132389 (+)
JF1/MsJ	ENSUMUG00000031601	snRNA gene	Chr11:82663786-82663892 (+)
LP/J	ENSMUSG00230029943	snRNA gene	Chr11:83367847-83367953 (+)
NOD/ShiLtJ	ENSMUSG00190020038	snRNA gene	Chr11:82344362-82344468 (+)
NZO/HlLtJ	ENSMUSG00225040109	snRNA gene	Chr11:85478027-85478133 (+)
PWK/PhJ	ENSLUMG00010025370	snRNA gene	Chr11:82164989-82165095 (+)
SPRET/EiJ	ENSMSPG00010029786	snRNA gene	Chr11:82629279-82629385 (+)
WSB/EiJ	ENSIUOG00005007967	snRNA gene	Chr11:82159473-82159579 (+)

Homology

• Gene Tree
  Gm23506
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm23506
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

• All GO Annotations
  5
• GO References
  1

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000119257 (Evidence)
• NCBI Gene
  115487937

Representative Sequences			Length	Strain/Species
genomic	115487937	NCBI Gene Model | MGI Sequence Detail	107	C57BL/6J
transcript	XR_004937392	RefSeq | MGI Sequence Detail	107	C57BL/6J

References

• Summaries
  All 9

  Gene Ontology 1

  Phenotypes 5
• Earliest
  J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
• Latest
  J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52