Gm23444 Gene Detail

Summary

• Symbol
  Gm23444
• Name
  predicted gene, 23444

• Feature Type
  snRNA gene
• IDs
  MGI:5453221
  NCBI Gene: 115487915
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:83162324-83162514 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  56 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453221	snRNA gene	Chr11:83162324-83162514 (+)
129S1/SvImJ	ENSMUSG00200051513	snRNA gene	Chr11:80281752-80281942 (+)
A/J	ENSMUSG00195045088	snRNA gene	Chr11:80136211-80136401 (+)
AKR/J	ENSMUSG00220048738	snRNA gene	Chr11:80357995-80358185 (+)
BALB/cJ	ENSMUSG00180044349	snRNA gene	Chr11:80350988-80351178 (+)
C3H/HeJ	ENSMUSG00175040734	snRNA gene	Chr11:80283222-80283412 (+)
C57BL/6NJ	ENSMUSG00215042539	snRNA gene	Chr11:79934625-79934815 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005045582	snRNA gene	Chr11:79810992-79811182 (+)
CBA/J	ENSMUSG00210047902	snRNA gene	Chr11:80100853-80101043 (+)
DBA/2J	ENSMUSG00185041269	snRNA gene	Chr11:80436245-80436435 (+)
FVB/NJ	ENSMUSG00205048578	snRNA gene	Chr11:80238565-80238755 (+)
JF1/MsJ	ENSUMUG00000054536	snRNA gene	Chr11:80751216-80751405 (+)
LP/J	ENSMUSG00230029426	snRNA gene	Chr11:81451013-81451203 (+)
NOD/ShiLtJ	ENSMUSG00190047390	snRNA gene	Chr11:80450896-80451086 (+)
NZO/HlLtJ	ENSMUSG00225039537	snRNA gene	Chr11:83584676-83584866 (+)
PWK/PhJ	ENSLUMG00010025895	snRNA gene	Chr11:80270436-80270626 (+)
SPRET/EiJ	ENSMSPG00010044032	snRNA gene	Chr11:80665019-80665209 (+)
WSB/EiJ	ENSIUOG00005036552	snRNA gene	Chr11:80258524-80258714 (+)

Homology

• Gene Tree
  Gm23444
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm23444
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000119838 (Evidence)
• NCBI Gene
  115487915

Representative Sequences			Length	Strain/Species
genomic	115487915	NCBI Gene Model | MGI Sequence Detail	191	C57BL/6J
transcript	XR_004937377	RefSeq | MGI Sequence Detail	191	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
• Latest
  J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52