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Rhox3a2 Gene Detail
Summary
  • Symbol
    Rhox3a2
  • Name
    reproductive homeobox 3A2
  • Synonyms
    Gm21085
  • Feature Type
    protein coding gene
  • IDs
    MGI:5434440
    NCBI Gene: 100861623
  • Member of
    Rhox cluster
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    ChrX:36562036-36566141 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • Strain Annotations
    5
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5434440
 protein coding gene ChrX:36561681-36566146 (+)
129S1/SvImJ no annotation
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0035296
 protein coding gene ChrX:34159844-34170018 (-)
DBA/2J MGP_DBA2J_G0035452
 protein coding gene ChrX:32554313-32559097 (-)
FVB/NJ MGP_FVBNJ_G0035393
 protein coding gene ChrX:32033443-32037394 (+)
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0034160
 protein coding gene ChrX:21271122-21274001 (+)
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    17
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 100861623 NCBI Gene Model | MGI Sequence Detail 4106 C57BL/6J ±  kb
transcript XM_003688970 RefSeq | MGI Sequence Detail 833 C57BL/6J  
polypeptide XP_003689018 RefSeq | MGI Sequence Detail 215 C57BL/6J  
For the selected sequence
References
more
  • Summaries
    All 7
    Phenotypes 3
  • Earliest
    J:229199 Song HW, et al., shRNA off-target effects in vivo: impaired endogenous siRNA expression and spermatogenic defects. PLoS One. 2015;10(3):e0118549
  • Latest
    J:306454 Tan K, et al., The Rhox gene cluster suppresses germline LINE1 transposition. Proc Natl Acad Sci U S A. 2021 Jun 8;118(23):e2024785118
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory