Gm19967 Gene Detail

Summary

• Symbol
  Gm19967
• Name
  predicted gene, 19967

• Feature Type
  lncRNA gene
• IDs
  MGI:5012152
  NCBI Gene: 100503922
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr11:70755486-70763580 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 43.21 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  67 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5012152	lncRNA gene	Chr11:70755486-70763580 (+)
129S1/SvImJ	ENSMUSG00200049734	lncRNA gene	Chr11:67702606-67710736 (+)
A/J	ENSMUSG00195052652	lncRNA gene	Chr11:67729236-67737331 (+)
AKR/J	ENSMUSG00220054188	lncRNA gene	Chr11:67846336-67854482 (+)
BALB/cJ	ENSMUSG00180054144	lncRNA gene	Chr11:67797491-67805623 (+)
C3H/HeJ	ENSMUSG00175054423	lncRNA gene	Chr11:67747850-67755982 (+)
C57BL/6NJ	ENSMUSG00215055073	lncRNA gene	Chr11:67525038-67533132 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034446	sense intronic lncRNA gene	Chr11:65629843-65638541 (+)
CAST/EiJ	ENSTCUG00005053649	lncRNA gene	Chr11:67291716-67299862 (+)
CBA/J	ENSMUSG00210054406	lncRNA gene	Chr11:67601930-67610063 (+)
DBA/2J	ENSMUSG00185056823	lncRNA gene	Chr11:67840122-67848273 (+)
FVB/NJ	ENSMUSG00205053968	lncRNA gene	Chr11:67695342-67703460 (+)
JF1/MsJ	ENSUMUG00000057113	lncRNA gene	Chr11:68238724-68246875 (+)
LP/J	ENSMUSG00230053820	lncRNA gene	Chr11:68913127-68921257 (+)
NOD/ShiLtJ	ENSMUSG00190054300	lncRNA gene	Chr11:67835447-67843592 (+)
NZO/HlLtJ	ENSMUSG00225040202	lncRNA gene	Chr11:71094323-71102453 (+)
PWK/PhJ	ENSLUMG00010053579	lncRNA gene	Chr11:67707220-67715365 (+)
SPRET/EiJ	ENSMSPG00010049621	lncRNA gene	Chr11:68435088-68443769 (+)
WSB/EiJ	ENSIUOG00005052872	lncRNA gene	Chr11:67727587-67735697 (+)

Homology

• Gene Tree
  Gm19967
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  8 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Targeted
  1
• Genomic Mutations
  2 involving Gm19967
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000093858 (Evidence)
• NCBI Gene
  100503922

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000093858	Ensembl Gene Model | MGI Sequence Detail	8095	C57BL/6J
transcript	ENSMUST00000179676	Ensembl | MGI Sequence Detail	2138	Not Applicable

References

• Summaries
  All 12

  Phenotypes 8
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52

TSS for Gm19967:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr102797	Chr11:70760487-70760495 (+)	5,005 bp