Rhox2e Gene Detail

Summary

• Symbol
  Rhox2e
• Name
  reproductive homeobox 2E
• Synonyms
  ENSMUSG00000063709, OTTMUSG00000017141

• Feature Type
  protein coding gene
• IDs
  MGI:3770272
  NCBI Gene: 100040016
• Member of
  Rhox cluster
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:36712105-36723466 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 21.83 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  6 from dbSNP Build 142
• Strain Annotations
  5

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3770272	protein coding gene	ChrX:36711975-36723466 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	ENSMUSG00175023562	protein coding gene	ChrX:24114619-24124542 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	ENSMUSG00185023290	protein coding gene	ChrX:32068826-32080187 (+)
FVB/NJ	no annotation
JF1/MsJ	no annotation
LP/J	ENSMUSG00230011856	protein coding gene	ChrX:38561005-38572368 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225039172	protein coding gene	ChrX:43767486-43778847 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• MGI Vertebrate Homology
  Rhox2e stringent orthology
  1 mouse;1 rat
  
• Gene Tree
  Rhox2e
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Endonuclease-mediated
  1
• Targeted
  1
• Genomic Mutations
  1 involving Rhox2e
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  6
• UniProt
  1
• CCDS
  CCDS53055.1

• Ensembl
  ENSMUSG00000096788 (Evidence)
• NCBI Gene
  100040016

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000096788	Ensembl Gene Model | MGI Sequence Detail	11362	C57BL/6J
transcript	ENSMUST00000072167	Ensembl | MGI Sequence Detail	799	Not Applicable
polypeptide	ENSMUSP00000072030	Ensembl | MGI Sequence Detail	191	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  Genomic 1

  
  

  Microarray probesets 1

Other
Accession IDs

MGI:3704508, MGI:3705231

References

• Summaries
  All 17

  Phenotypes 4
• Earliest
  J:96937 Maclean JA 2nd, et al., Rhox: a new homeobox gene cluster. Cell. 2005 Feb 11;120(3):369-82
• Latest
  J:306454 Tan K, et al., The Rhox gene cluster suppresses germline LINE1 transposition. Proc Natl Acad Sci U S A. 2021 Jun 8;118(23):e2024785118