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Gm11541 Gene Detail
Summary
  • Symbol
    Gm11541
  • Name
    predicted gene 11541
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3650066
    NCBI Gene: 432589
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr11:94585324-94595325 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 58.90 cM
Strain
Comparison
more
  • SNPs within 2kb
    104 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3650066
 lncRNA gene Chr11:94585323-94595325 (-)
129S1/SvImJ MGP_129S1SvImJ_G0018967
 protein coding gene Chr11:96810546-96822211 (-)
A/J MGP_AJ_G0018935
 protein coding gene Chr11:92924294-92935238 (-)
AKR/J MGP_AKRJ_G0018905
 protein coding gene Chr11:95814385-95824226 (-)
BALB/cJ MGP_BALBcJ_G0018908
 protein coding gene Chr11:93373449-93384293 (-)
C3H/HeJ MGP_C3HHeJ_G0018722
 protein coding gene Chr11:95898730-95908555 (-)
C57BL/6NJ MGP_C57BL6NJ_G0019360
 protein coding gene Chr11:99843892-99858989 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0016991
 protein coding gene Chr11:90416113-90424961 (-)
CAST/EiJ MGP_CASTEiJ_G0018277
 protein coding gene Chr11:96629460-96639143 (-)
CBA/J MGP_CBAJ_G0018693
 protein coding gene Chr11:103972740-103982525 (-)
DBA/2J MGP_DBA2J_G0018801
 protein coding gene Chr11:92506463-92516842 (-)
FVB/NJ MGP_FVBNJ_G0018790
 protein coding gene Chr11:91923540-91933760 (-)
LP/J MGP_LPJ_G0018871
 protein coding gene Chr11:97348564-97358373 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0018817
 protein coding gene Chr11:103972992-103985652 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0019400
 protein coding gene Chr11:96053447-96063434 (-)
PWK/PhJ MGP_PWKPhJ_G0018047
 protein coding gene Chr11:93439283-93449413 (-)
SPRET/EiJ MGP_SPRETEiJ_G0017837
 protein coding gene Chr11:95722747-95734067 (-)
WSB/EiJ MGP_WSBEiJ_G0018326
 protein coding gene Chr11:95926599-95936534 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000056008 Ensembl Gene Model | MGI Sequence Detail 10002 C57BL/6J ±  kb
transcript ENSMUST00000069852 Ensembl | MGI Sequence Detail 1681 Not Applicable  
polypeptide Q8C4D8 UniProt | EBI | MGI Sequence Detail 108 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 1
References
more
  • Summaries
    All 19
    Phenotypes 8
  • Earliest
    J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
  • Latest
    J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory