Gm11201 Gene Detail

Summary

• Symbol
  Gm11201
• Name
  predicted gene 11201
• Synonyms
  ENSMUSG00000072637

• Feature Type
  lncRNA gene
• IDs
  MGI:3649951
  NCBI Gene: 790910
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:78914423-78921883 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 46.74 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  324 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649951	lncRNA gene	Chr11:78914423-78925831 (+)
129S1/SvImJ	ENSMUSG00200052221	lncRNA gene	Chr11:76031328-76038793 (+)
A/J	ENSMUSG00195046323	lncRNA gene	Chr11:75910167-75917633 (+)
AKR/J	ENSMUSG00220048623	lncRNA gene	Chr11:76134115-76141581 (+)
BALB/cJ	ENSMUSG00180043853	lncRNA gene	Chr11:76098985-76106453 (+)
C3H/HeJ	ENSMUSG00175039061	lncRNA gene	Chr11:76068234-76075702 (+)
C57BL/6NJ	ENSMUSG00215042582	lncRNA gene	Chr11:75692169-75699635 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002659	antisense lncRNA gene	Chr11:73970363-73977875 (+)
CAST/EiJ	ENSTCUG00005046377	lncRNA gene	Chr11:75598380-75605900 (+)
CBA/J	ENSMUSG00210046663	lncRNA gene	Chr11:75891896-75899362 (+)
DBA/2J	ENSMUSG00185039898	lncRNA gene	Chr11:76156611-76164077 (+)
FVB/NJ	ENSMUSG00205046583	lncRNA gene	Chr11:75994583-76002047 (+)
JF1/MsJ	ENSUMUG00000052471	lncRNA gene	Chr11:76545582-76553079 (+)
LP/J	ENSMUSG00230049821	lncRNA gene	Chr11:77187002-77194464 (+)
NOD/ShiLtJ	ENSMUSG00190048433	lncRNA gene	Chr11:76203636-76211100 (+)
NZO/HlLtJ	ENSMUSG00225039560	lncRNA gene	Chr11:79354531-79361998 (+)
PWK/PhJ	ENSLUMG00010025868	lncRNA gene	Chr11:76070502-76077978 (+)
SPRET/EiJ	ENSMSPG00010043854	lncRNA gene	Chr11:76478903-76486230 (+)
WSB/EiJ	ENSIUOG00005037123	lncRNA gene	Chr11:76046825-76054290 (+)

Homology

• Gene Tree
  Gm11201
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  10 phenotype references
  

• All Mutations and Alleles
  7
• Chemically induced (other)
  1
• Gene trapped
  5
• Targeted
  1
• Genomic Mutations
  2 involving Gm11201
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597
• cDNA Data
  3

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000085941 (Evidence)
• NCBI Gene
  790910

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000085941	Ensembl Gene Model | MGI Sequence Detail	7461	C57BL/6J
transcript	ENSMUST00000143473	Ensembl | MGI Sequence Detail	701	Not Applicable
polypeptide	Q3U4T0	UniProt | EBI | MGI Sequence Detail	179	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 3

  cDNA 3

  
  

  Microarray probesets 1

Other
Accession IDs

MGI:3642887

References

• Summaries
  All 22

  Phenotypes 10
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52